Top 10 genes with highest correlation to Rv0376c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3366/spoU | (cc=0.5989) | info on Rv3366/spoU |
| Rv3897c/- | (cc=0.5866) | info on Rv3897c/- |
| Rv3705A/- | (cc=0.5554) | info on Rv3705A/- |
| Rv0887c/- | (cc=0.5547) | info on Rv0887c/- |
| Rv0593/lprL | (cc=0.5537) | info on Rv0593/lprL |
| Rv2625c/- | (cc=0.5517) | info on Rv2625c/- |
| Rv0359/- | (cc=0.5513) | info on Rv0359/- |
| Rv3295/- | (cc=0.5507) | info on Rv3295/- |
| Rv0379/secE2 | (cc=0.5506) | info on Rv0379/secE2 |
| Rv0079/- | (cc=0.5445) | info on Rv0079/- |
Correlation of Rv0376c/- with Rv0379/secE2
Normalized LFCs for Rv0376c/-:
(description and provenance of datasets)
| Rv0376c/- | Rv0379/secE2 | |
| Fe_supp_jason_reseq | -0.63 | -0.707 |
| low_pH_jason_reseq | -1.325 | -0.32 |
| NO_jason_reseq | -0.795 | 1.197 |
| B6_jason_reseq | -0.028 | -0.727 |
| MHCII_jason_reseq | -0.012 | -0.542 |
| Isoniazid02 | -0.518 | 0.799 |
| Rifampicin4 | 0.208 | 0.046 |
| Ethambutol3 | -0.411 | 1.3 |
| Meropenem3 | 0.008 | 0.272 |
| Vancomycin16 | -0.175 | 0.44 |
| Rv2680_day32 | -0.134 | -0.692 |
| H37Rv_KO_MarP | 0.415 | -0.339 |
| hypoxia_3wks | -0.223 | -1.703 |
| hypoxia_6wks | 0.524 | 0.597 |
| glycerol | 0.607 | 1.29 |
| cholesterol | 0.238 | 0.307 |
| AJ | 0.481 | 0.178 |
| Bibs02 | 0.706 | 0.943 |
| Bibs02c | 0.252 | 0.562 |
| BL6 | 0.311 | -0.753 |
| BL6a | -0.139 | -0.694 |
| BXD01 | -0.309 | -3.242 |
| BXD010 | -0.717 | -1.486 |
| BXD011 | -0.695 | -2.338 |
| BXD03 | -0.49 | -3.193 |
| BXD04 | -0.39 | -2.154 |
| BXD05 | 0.655 | -2.001 |
| BXD06 | -0.868 | -1.712 |
| BXD07 | -0.735 | -3.111 |
| BXD08 | -0.706 | -2.542 |
| BXD09 | -0.982 | -2.019 |
| CAST | 0.242 | -0.552 |
| CCcont | -0.752 | -1.958 |
| DS01 | 0.828 | 0.289 |
| DS02 | 1.15 | 0.159 |
| DS04 | -0.32 | 0.048 |
| DS0c | 0.812 | -0.13 |
| GP01 | 0.081 | -2.055 |
| GP02 | -0.097 | -2.334 |
| GP0c | -0.41 | -2.237 |
| NOD | 0.418 | -0.937 |
| NZO | -0.432 | -0.759 |
| PWK | -0.102 | 0.681 |
| H37Rv_KO_CtpC | -0.352 | -0.505 |
| H37Rv_KO_CtpD | -0.691 | -0.49 |
| H37Rv_KO_Rv1272 | -0.81 | 0.006 |
| H37Rv_KO_SugABC | -1.064 | -2.379 |
| H37Rv_KO_MbtN | -0.756 | -1.646 |
| Trans05 | 0.167 | -0.513 |
| macrophage_unactivated | -1.234 | 0.035 |
| IL1 | -0.632 | -0.392 |
| Rapamycin | -0.786 | -0.365 |
| Tcell | -0.495 | -1.039 |
| GMCSF | -0.454 | -2.521 |
| IFNab | -1.327 | -1.466 |
| IFNg | -0.684 | -1.048 |
| IFNg_GMCSF1 | -1.084 | 2.118 |
| Rv1432_day32 | -0.481 | 0.18 |
| Rv1565c_day32 | 0.676 | -0.085 |
| secA2_input | 1.061 | -1.49 |
| delta_Rv3594 | -0.159 | 0.078 |
| delta_Rv3717 | 0.292 | -1.111 |
| delta_Rv3811 | 0.449 | 0.843 |
| delta_Rv0954 | 0.425 | 1.454 |
| PonA1 | 1.338 | 0.87 |
| EccD1_KO | -0.947 | -0.02 |
| EspI_KO | -0.097 | 0.319 |
| PE35_KO | -0.382 | 0.055 |
| PPE68_KO | -0.419 | 0.32 |
| glycerol2 | 0.395 | 1.188 |
| lignocerate | 0.958 | 2.25 |
| oleate | 0.432 | 0.0 |
| phosphatidylcholine | 0.64 | 1.401 |
| acetate | 0.826 | 3.712 |
| glucAc | 0.974 | 3.12 |
| Rv0950ko | 1.505 | 3.347 |
| Rv1096ko | 1.972 | 2.925 |
| Rv3684ko | 2.06 | 2.689 |
| delta_otsA_trehalose | -1.522 | -1.235 |