Top 10 genes with highest correlation to Rv0360c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3417c/groEL1 | (cc=0.5192) | info on Rv3417c/groEL1 |
| Rv0551c/fadD8 | (cc=0.5105) | info on Rv0551c/fadD8 |
| Rv3839/- | (cc=0.4785) | info on Rv3839/- |
| Rv0553/menC | (cc=0.4367) | info on Rv0553/menC |
| Rv1194c/- | (cc=0.4365) | info on Rv1194c/- |
| Rv0038/- | (cc=0.4202) | info on Rv0038/- |
| Rv3651/- | (cc=0.4179) | info on Rv3651/- |
| Rv3577/- | (cc=0.4145) | info on Rv3577/- |
| Rv0392c/ndhA | (cc=0.4064) | info on Rv0392c/ndhA |
| Rv3715c/recR | (cc=0.3926) | info on Rv3715c/recR |
Correlation of Rv0360c/- with Rv3839/-
Normalized LFCs for Rv0360c/-:
(description and provenance of datasets)
| Rv0360c/- | Rv3839/- | |
| Fe_supp_jason_reseq | -0.137 | 0.472 |
| low_pH_jason_reseq | -0.557 | 0.549 |
| NO_jason_reseq | -1.425 | -2.263 |
| B6_jason_reseq | -1.11 | 1.347 |
| MHCII_jason_reseq | -0.725 | 0.609 |
| Isoniazid02 | -0.089 | -0.3 |
| Rifampicin4 | -0.523 | -0.663 |
| Ethambutol3 | -0.807 | -0.111 |
| Meropenem3 | 1.926 | -0.047 |
| Vancomycin16 | -0.308 | -0.302 |
| Rv2680_day32 | -0.961 | 1.935 |
| H37Rv_KO_MarP | -0.014 | -0.087 |
| hypoxia_3wks | -0.187 | 0.845 |
| hypoxia_6wks | 0.23 | 0.731 |
| glycerol | 0.218 | 0.508 |
| cholesterol | 0.408 | -0.179 |
| AJ | 0.815 | 1.933 |
| Bibs02 | -0.448 | -0.517 |
| Bibs02c | 0.059 | 0.465 |
| BL6 | -0.086 | 0.526 |
| BL6a | -0.281 | 0.703 |
| BXD01 | 0.441 | 0.967 |
| BXD010 | 0.636 | 0.4 |
| BXD011 | 0.137 | 0.465 |
| BXD03 | -0.135 | 1.4 |
| BXD04 | -0.098 | 0.555 |
| BXD05 | -0.447 | 0.772 |
| BXD06 | 0.178 | 0.561 |
| BXD07 | 0.126 | 0.759 |
| BXD08 | -0.219 | 0.434 |
| BXD09 | 0.312 | 0.749 |
| CAST | -1.019 | 1.71 |
| CCcont | 1.534 | -0.415 |
| DS01 | 0.63 | 0.922 |
| DS02 | 0.499 | 0.914 |
| DS04 | 1.664 | 1.138 |
| DS0c | 1.287 | 0.943 |
| GP01 | 0.706 | 0.099 |
| GP02 | -0.668 | -0.391 |
| GP0c | -0.214 | -0.271 |
| NOD | 0.633 | 3.022 |
| NZO | 0.701 | 1.585 |
| PWK | -0.679 | 0.354 |
| H37Rv_KO_CtpC | -1.518 | 0.459 |
| H37Rv_KO_CtpD | 0.137 | 0.644 |
| H37Rv_KO_Rv1272 | -0.73 | 0.448 |
| H37Rv_KO_SugABC | 0.368 | 0.955 |
| H37Rv_KO_MbtN | 0.697 | 0.685 |
| Trans05 | -0.598 | 0.949 |
| macrophage_unactivated | 0.142 | 0.23 |
| IL1 | -2.788 | -0.697 |
| Rapamycin | 0.184 | -0.104 |
| Tcell | -1.189 | -0.274 |
| GMCSF | -0.911 | 0.359 |
| IFNab | -0.49 | 1.034 |
| IFNg | -1.542 | -0.649 |
| IFNg_GMCSF1 | -0.352 | 0.0 |
| Rv1432_day32 | 0.87 | 1.249 |
| Rv1565c_day32 | -0.801 | 2.35 |
| secA2_input | -0.089 | 1.371 |
| delta_Rv3594 | 0.811 | -0.109 |
| delta_Rv3717 | -0.059 | -0.179 |
| delta_Rv3811 | 0.034 | -0.086 |
| delta_Rv0954 | 1.009 | -0.063 |
| PonA1 | 0.129 | -0.082 |
| EccD1_KO | -0.194 | -0.227 |
| EspI_KO | -0.188 | -0.924 |
| PE35_KO | -0.37 | -0.945 |
| PPE68_KO | -0.406 | -1.081 |
| glycerol2 | -1.014 | -0.073 |
| lignocerate | -0.41 | -0.589 |
| oleate | -0.971 | 0.062 |
| phosphatidylcholine | -0.916 | -0.265 |
| acetate | -1.026 | -0.593 |
| glucAc | -0.5 | -0.528 |
| Rv0950ko | 0.645 | 1.677 |
| Rv1096ko | 0.697 | 1.101 |
| Rv3684ko | 0.894 | 1.808 |
| delta_otsA_trehalose | 3.117 | 6.0 |