Top 10 genes with highest correlation to Rv0360c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3417c/groEL1 | (cc=0.5192) | info on Rv3417c/groEL1 |
| Rv0551c/fadD8 | (cc=0.5105) | info on Rv0551c/fadD8 |
| Rv3839/- | (cc=0.4785) | info on Rv3839/- |
| Rv0553/menC | (cc=0.4367) | info on Rv0553/menC |
| Rv1194c/- | (cc=0.4365) | info on Rv1194c/- |
| Rv0038/- | (cc=0.4202) | info on Rv0038/- |
| Rv3651/- | (cc=0.4179) | info on Rv3651/- |
| Rv3577/- | (cc=0.4145) | info on Rv3577/- |
| Rv0392c/ndhA | (cc=0.4064) | info on Rv0392c/ndhA |
| Rv3715c/recR | (cc=0.3926) | info on Rv3715c/recR |
Correlation of Rv0360c/- with Rv0038/-
Normalized LFCs for Rv0360c/-:
(description and provenance of datasets)
| Rv0360c/- | Rv0038/- | |
| Fe_supp_jason_reseq | -0.137 | 0.639 |
| low_pH_jason_reseq | -0.557 | -2.28 |
| NO_jason_reseq | -1.425 | -1.809 |
| B6_jason_reseq | -1.11 | -0.172 |
| MHCII_jason_reseq | -0.725 | 0.482 |
| Isoniazid02 | -0.089 | 1.078 |
| Rifampicin4 | -0.523 | -0.125 |
| Ethambutol3 | -0.807 | 1.394 |
| Meropenem3 | 1.926 | 0.518 |
| Vancomycin16 | -0.308 | 0.0 |
| Rv2680_day32 | -0.961 | 0.349 |
| H37Rv_KO_MarP | -0.014 | -0.707 |
| hypoxia_3wks | -0.187 | -0.67 |
| hypoxia_6wks | 0.23 | -0.883 |
| glycerol | 0.218 | 0.914 |
| cholesterol | 0.408 | 1.171 |
| AJ | 0.815 | -0.745 |
| Bibs02 | -0.448 | 0.525 |
| Bibs02c | 0.059 | 1.638 |
| BL6 | -0.086 | -1.116 |
| BL6a | -0.281 | 0.914 |
| BXD01 | 0.441 | -0.304 |
| BXD010 | 0.636 | -0.165 |
| BXD011 | 0.137 | -0.985 |
| BXD03 | -0.135 | -1.083 |
| BXD04 | -0.098 | -1.363 |
| BXD05 | -0.447 | -0.28 |
| BXD06 | 0.178 | -0.323 |
| BXD07 | 0.126 | -0.975 |
| BXD08 | -0.219 | -0.835 |
| BXD09 | 0.312 | -0.558 |
| CAST | -1.019 | -2.129 |
| CCcont | 1.534 | 1.46 |
| DS01 | 0.63 | 1.406 |
| DS02 | 0.499 | -0.232 |
| DS04 | 1.664 | 0.887 |
| DS0c | 1.287 | 1.397 |
| GP01 | 0.706 | -0.027 |
| GP02 | -0.668 | -0.783 |
| GP0c | -0.214 | 0.109 |
| NOD | 0.633 | -1.302 |
| NZO | 0.701 | -0.198 |
| PWK | -0.679 | -1.689 |
| H37Rv_KO_CtpC | -1.518 | -1.101 |
| H37Rv_KO_CtpD | 0.137 | -0.052 |
| H37Rv_KO_Rv1272 | -0.73 | 0.323 |
| H37Rv_KO_SugABC | 0.368 | -0.282 |
| H37Rv_KO_MbtN | 0.697 | 0.28 |
| Trans05 | -0.598 | -1.208 |
| macrophage_unactivated | 0.142 | -0.287 |
| IL1 | -2.788 | -1.456 |
| Rapamycin | 0.184 | -1.212 |
| Tcell | -1.189 | -1.763 |
| GMCSF | -0.911 | -1.397 |
| IFNab | -0.49 | -0.695 |
| IFNg | -1.542 | -1.962 |
| IFNg_GMCSF1 | -0.352 | -1.543 |
| Rv1432_day32 | 0.87 | -0.143 |
| Rv1565c_day32 | -0.801 | -0.603 |
| secA2_input | -0.089 | -0.085 |
| delta_Rv3594 | 0.811 | 1.597 |
| delta_Rv3717 | -0.059 | 1.212 |
| delta_Rv3811 | 0.034 | 1.057 |
| delta_Rv0954 | 1.009 | 2.218 |
| PonA1 | 0.129 | 1.599 |
| EccD1_KO | -0.194 | 0.0 |
| EspI_KO | -0.188 | 0.405 |
| PE35_KO | -0.37 | 0.922 |
| PPE68_KO | -0.406 | 0.378 |
| glycerol2 | -1.014 | 0.544 |
| lignocerate | -0.41 | -0.587 |
| oleate | -0.971 | -1.113 |
| phosphatidylcholine | -0.916 | -0.353 |
| acetate | -1.026 | 0.657 |
| glucAc | -0.5 | 0.653 |
| Rv0950ko | 0.645 | 0.88 |
| Rv1096ko | 0.697 | 0.199 |
| Rv3684ko | 0.894 | -0.2 |
| delta_otsA_trehalose | 3.117 | 0.056 |