Top 10 genes with highest correlation to Rv0353/hspR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0190/- | (cc=0.6407) | info on Rv0190/- |
| Rv3544c/fadE28 | (cc=0.5914) | info on Rv3544c/fadE28 |
| Rv1273c/- | (cc=0.58) | info on Rv1273c/- |
| Rv2604c/snoP | (cc=0.5776) | info on Rv2604c/snoP |
| Rv2467/pepN | (cc=0.5674) | info on Rv2467/pepN |
| Rv3880c/espL | (cc=0.5637) | info on Rv3880c/espL |
| Rv3551/- | (cc=0.5626) | info on Rv3551/- |
| Rv0806c/cpsY | (cc=0.5516) | info on Rv0806c/cpsY |
| Rv3870/eccCa1 | (cc=0.5491) | info on Rv3870/eccCa1 |
| Rv3540c/ltp2 | (cc=0.5483) | info on Rv3540c/ltp2 |
Correlation of Rv0353/hspR with Rv1273c/-
Normalized LFCs for Rv0353/hspR:
(description and provenance of datasets)
| Rv0353/hspR | Rv1273c/- | |
| Fe_supp_jason_reseq | 1.081 | 0.297 |
| low_pH_jason_reseq | 0.395 | 0.284 |
| NO_jason_reseq | -2.998 | -1.16 |
| B6_jason_reseq | -2.146 | -1.759 |
| MHCII_jason_reseq | -3.028 | -2.413 |
| Isoniazid02 | -3.178 | 2.039 |
| Rifampicin4 | -0.829 | -1.438 |
| Ethambutol3 | -0.204 | 1.315 |
| Meropenem3 | -1.399 | 0.594 |
| Vancomycin16 | -1.937 | 0.284 |
| Rv2680_day32 | 0.642 | -1.672 |
| H37Rv_KO_MarP | -3.539 | 0.562 |
| hypoxia_3wks | -0.853 | -0.152 |
| hypoxia_6wks | 0.775 | 0.19 |
| glycerol | 0.234 | -1.434 |
| cholesterol | -1.489 | -2.353 |
| AJ | -5.296 | -2.84 |
| Bibs02 | -1.468 | -0.958 |
| Bibs02c | -1.4 | -1.546 |
| BL6 | -2.378 | 0.22 |
| BL6a | -2.165 | -1.524 |
| BXD01 | -1.113 | -1.043 |
| BXD010 | -1.644 | -0.671 |
| BXD011 | -1.833 | -0.731 |
| BXD03 | -0.98 | -0.999 |
| BXD04 | -2.823 | -1.071 |
| BXD05 | -1.913 | -0.772 |
| BXD06 | -2.356 | -0.546 |
| BXD07 | -2.409 | -0.692 |
| BXD08 | -2.829 | -1.693 |
| BXD09 | -2.844 | -1.315 |
| CAST | -5.564 | -2.239 |
| CCcont | 0.629 | 0.956 |
| DS01 | -6.0 | -2.892 |
| DS02 | -4.874 | -1.304 |
| DS04 | -4.51 | -0.711 |
| DS0c | -4.777 | -2.555 |
| GP01 | -2.928 | -0.029 |
| GP02 | -2.403 | -0.477 |
| GP0c | -2.053 | 0.145 |
| NOD | -3.965 | -1.946 |
| NZO | -5.916 | -2.539 |
| PWK | -5.391 | -2.703 |
| H37Rv_KO_CtpC | -0.238 | -1.463 |
| H37Rv_KO_CtpD | -2.606 | -1.28 |
| H37Rv_KO_Rv1272 | -3.407 | -2.107 |
| H37Rv_KO_SugABC | -1.942 | 0.354 |
| H37Rv_KO_MbtN | -0.756 | -0.128 |
| Trans05 | -2.274 | -2.123 |
| macrophage_unactivated | -1.865 | 1.168 |
| IL1 | 1.213 | 2.468 |
| Rapamycin | 0.19 | 2.142 |
| Tcell | 0.264 | 1.251 |
| GMCSF | -1.663 | 0.438 |
| IFNab | -1.215 | 0.209 |
| IFNg | -0.452 | 0.647 |
| IFNg_GMCSF1 | -2.507 | 0.666 |
| Rv1432_day32 | -2.312 | -1.777 |
| Rv1565c_day32 | -0.415 | -0.913 |
| secA2_input | 1.991 | -0.188 |
| delta_Rv3594 | 0.125 | 0.026 |
| delta_Rv3717 | 1.212 | 0.298 |
| delta_Rv3811 | -0.147 | -0.361 |
| delta_Rv0954 | 0.567 | 0.469 |
| PonA1 | -1.895 | 0.688 |
| EccD1_KO | -0.753 | -0.424 |
| EspI_KO | -0.653 | -0.536 |
| PE35_KO | -1.21 | 0.878 |
| PPE68_KO | -1.049 | 0.166 |
| glycerol2 | -5.507 | -1.595 |
| lignocerate | -1.453 | -0.453 |
| oleate | -5.475 | -0.196 |
| phosphatidylcholine | -0.436 | 0.09 |
| acetate | 0.785 | 2.153 |
| glucAc | 0.882 | 1.1 |
| Rv0950ko | 0.669 | 0.048 |
| Rv1096ko | -1.399 | 0.941 |
| Rv3684ko | 0.763 | 0.265 |
| delta_otsA_trehalose | -1.134 | -0.908 |