Top 10 genes with highest correlation to Rv0353/hspR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0190/- | (cc=0.6407) | info on Rv0190/- |
| Rv3544c/fadE28 | (cc=0.5914) | info on Rv3544c/fadE28 |
| Rv1273c/- | (cc=0.58) | info on Rv1273c/- |
| Rv2604c/snoP | (cc=0.5776) | info on Rv2604c/snoP |
| Rv2467/pepN | (cc=0.5674) | info on Rv2467/pepN |
| Rv3880c/espL | (cc=0.5637) | info on Rv3880c/espL |
| Rv3551/- | (cc=0.5626) | info on Rv3551/- |
| Rv0806c/cpsY | (cc=0.5516) | info on Rv0806c/cpsY |
| Rv3870/eccCa1 | (cc=0.5491) | info on Rv3870/eccCa1 |
| Rv3540c/ltp2 | (cc=0.5483) | info on Rv3540c/ltp2 |
Correlation of Rv0353/hspR with Rv0190/-
Normalized LFCs for Rv0353/hspR:
(description and provenance of datasets)
| Rv0353/hspR | Rv0190/- | |
| Fe_supp_jason_reseq | 1.081 | 3.343 |
| low_pH_jason_reseq | 0.395 | -0.417 |
| NO_jason_reseq | -2.998 | -0.189 |
| B6_jason_reseq | -2.146 | 0.219 |
| MHCII_jason_reseq | -3.028 | -1.92 |
| Isoniazid02 | -3.178 | -2.708 |
| Rifampicin4 | -0.829 | 0.046 |
| Ethambutol3 | -0.204 | -0.479 |
| Meropenem3 | -1.399 | 0.736 |
| Vancomycin16 | -1.937 | -0.923 |
| Rv2680_day32 | 0.642 | -2.322 |
| H37Rv_KO_MarP | -3.539 | -0.701 |
| hypoxia_3wks | -0.853 | -1.95 |
| hypoxia_6wks | 0.775 | -0.349 |
| glycerol | 0.234 | -1.024 |
| cholesterol | -1.489 | -2.25 |
| AJ | -5.296 | -5.593 |
| Bibs02 | -1.468 | -5.141 |
| Bibs02c | -1.4 | -3.794 |
| BL6 | -2.378 | -2.372 |
| BL6a | -2.165 | -3.645 |
| BXD01 | -1.113 | -2.362 |
| BXD010 | -1.644 | -3.899 |
| BXD011 | -1.833 | -2.848 |
| BXD03 | -0.98 | -1.208 |
| BXD04 | -2.823 | -2.458 |
| BXD05 | -1.913 | -2.27 |
| BXD06 | -2.356 | -2.189 |
| BXD07 | -2.409 | -3.551 |
| BXD08 | -2.829 | -3.029 |
| BXD09 | -2.844 | -3.035 |
| CAST | -5.564 | -3.482 |
| CCcont | 0.629 | -0.227 |
| DS01 | -6.0 | -4.041 |
| DS02 | -4.874 | -4.392 |
| DS04 | -4.51 | -1.255 |
| DS0c | -4.777 | -3.414 |
| GP01 | -2.928 | -3.194 |
| GP02 | -2.403 | -2.692 |
| GP0c | -2.053 | -3.568 |
| NOD | -3.965 | -1.616 |
| NZO | -5.916 | -6.0 |
| PWK | -5.391 | -5.972 |
| H37Rv_KO_CtpC | -0.238 | 0.746 |
| H37Rv_KO_CtpD | -2.606 | -1.413 |
| H37Rv_KO_Rv1272 | -3.407 | -3.099 |
| H37Rv_KO_SugABC | -1.942 | -0.487 |
| H37Rv_KO_MbtN | -0.756 | 0.22 |
| Trans05 | -2.274 | -2.773 |
| macrophage_unactivated | -1.865 | 0.098 |
| IL1 | 1.213 | -1.486 |
| Rapamycin | 0.19 | -0.509 |
| Tcell | 0.264 | 2.203 |
| GMCSF | -1.663 | -1.502 |
| IFNab | -1.215 | -1.793 |
| IFNg | -0.452 | -0.54 |
| IFNg_GMCSF1 | -2.507 | -0.987 |
| Rv1432_day32 | -2.312 | -5.743 |
| Rv1565c_day32 | -0.415 | -2.011 |
| secA2_input | 1.991 | -0.775 |
| delta_Rv3594 | 0.125 | -1.811 |
| delta_Rv3717 | 1.212 | -1.032 |
| delta_Rv3811 | -0.147 | -1.524 |
| delta_Rv0954 | 0.567 | -0.092 |
| PonA1 | -1.895 | 0.534 |
| EccD1_KO | -0.753 | -1.638 |
| EspI_KO | -0.653 | -2.493 |
| PE35_KO | -1.21 | -0.537 |
| PPE68_KO | -1.049 | -0.022 |
| glycerol2 | -5.507 | -3.834 |
| lignocerate | -1.453 | -3.114 |
| oleate | -5.475 | -4.388 |
| phosphatidylcholine | -0.436 | -2.787 |
| acetate | 0.785 | -0.864 |
| glucAc | 0.882 | -0.64 |
| Rv0950ko | 0.669 | 0.838 |
| Rv1096ko | -1.399 | -0.685 |
| Rv3684ko | 0.763 | 0.449 |
| delta_otsA_trehalose | -1.134 | -0.116 |