Top 10 genes with highest correlation to Rv0321/dcd:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3144c/PPE52 | (cc=0.5523) | info on Rv3144c/PPE52 |
| Rv0078A/- | (cc=0.4916) | info on Rv0078A/- |
| Rv0677c/mmpS5 | (cc=0.4824) | info on Rv0677c/mmpS5 |
| Rv2129c/- | (cc=0.4691) | info on Rv2129c/- |
| Rv0597c/- | (cc=0.4652) | info on Rv0597c/- |
| Rv1004c/- | (cc=0.4501) | info on Rv1004c/- |
| Rv0036c/- | (cc=0.4438) | info on Rv0036c/- |
| Rv1468c/PE_PGRS29 | (cc=0.4409) | info on Rv1468c/PE_PGRS29 |
| Rv0779c/- | (cc=0.4231) | info on Rv0779c/- |
| Rv2337c/- | (cc=0.4227) | info on Rv2337c/- |
Correlation of Rv0321/dcd with Rv1468c/PE_PGRS29
Normalized LFCs for Rv0321/dcd:
(description and provenance of datasets)
| Rv0321/dcd | Rv1468c/PE_PGRS29 | |
| Fe_supp_jason_reseq | 0.129 | 0.425 |
| low_pH_jason_reseq | 0.279 | 0.274 |
| NO_jason_reseq | 0.36 | -1.229 |
| B6_jason_reseq | 0.064 | -0.718 |
| MHCII_jason_reseq | -0.094 | -0.801 |
| Isoniazid02 | 1.157 | 0.303 |
| Rifampicin4 | -0.498 | 1.968 |
| Ethambutol3 | 3.996 | 1.278 |
| Meropenem3 | 0.235 | 1.473 |
| Vancomycin16 | -0.639 | 0.43 |
| Rv2680_day32 | -1.689 | -0.64 |
| H37Rv_KO_MarP | -0.399 | -0.049 |
| hypoxia_3wks | -0.06 | -0.694 |
| hypoxia_6wks | -0.921 | -0.735 |
| glycerol | -0.127 | 0.0 |
| cholesterol | -1.382 | -0.388 |
| AJ | -0.091 | 1.612 |
| Bibs02 | -2.085 | 0.389 |
| Bibs02c | 0.015 | 0.0 |
| BL6 | -3.422 | -0.835 |
| BL6a | 0.36 | 0.0 |
| BXD01 | -0.02 | 0.235 |
| BXD010 | 1.263 | -0.675 |
| BXD011 | -0.574 | -0.078 |
| BXD03 | 0.041 | -0.2 |
| BXD04 | -0.42 | 0.024 |
| BXD05 | 0.525 | 0.308 |
| BXD06 | 0.225 | -0.428 |
| BXD07 | -0.344 | 0.339 |
| BXD08 | 0.19 | 0.519 |
| BXD09 | -0.033 | 0.054 |
| CAST | -0.529 | 0.415 |
| CCcont | -3.452 | 0.168 |
| DS01 | -0.729 | 0.652 |
| DS02 | 0.175 | 0.789 |
| DS04 | 1.276 | 1.835 |
| DS0c | -0.017 | -0.178 |
| GP01 | 0.997 | 1.93 |
| GP02 | 0.754 | 0.863 |
| GP0c | 3.766 | 1.155 |
| NOD | -0.537 | -0.436 |
| NZO | 0.35 | 0.751 |
| PWK | 0.186 | 0.254 |
| H37Rv_KO_CtpC | 2.004 | 1.094 |
| H37Rv_KO_CtpD | 1.539 | 2.032 |
| H37Rv_KO_Rv1272 | 0.558 | 1.204 |
| H37Rv_KO_SugABC | -1.572 | 0.346 |
| H37Rv_KO_MbtN | 0.232 | 1.692 |
| Trans05 | 0.543 | -0.193 |
| macrophage_unactivated | -1.162 | -0.117 |
| IL1 | -1.023 | -0.169 |
| Rapamycin | -1.059 | -0.608 |
| Tcell | -0.56 | 0.059 |
| GMCSF | -0.676 | 0.143 |
| IFNab | 2.234 | -0.599 |
| IFNg | -0.772 | -1.141 |
| IFNg_GMCSF1 | -1.618 | 0.798 |
| Rv1432_day32 | 0.074 | 0.07 |
| Rv1565c_day32 | -0.75 | -1.33 |
| secA2_input | 0.114 | -0.462 |
| delta_Rv3594 | 0.915 | 0.6 |
| delta_Rv3717 | 1.326 | 0.865 |
| delta_Rv3811 | 0.573 | 0.708 |
| delta_Rv0954 | 0.375 | 1.499 |
| PonA1 | 0.871 | 0.99 |
| EccD1_KO | -1.371 | -0.523 |
| EspI_KO | -2.108 | -0.787 |
| PE35_KO | -2.511 | -0.505 |
| PPE68_KO | -2.457 | -0.291 |
| glycerol2 | -2.35 | -0.22 |
| lignocerate | -2.811 | 0.033 |
| oleate | -0.967 | 0.057 |
| phosphatidylcholine | -2.025 | -0.262 |
| acetate | -2.864 | -0.163 |
| glucAc | -2.422 | -0.491 |
| Rv0950ko | -0.356 | 0.202 |
| Rv1096ko | 0.425 | -0.127 |
| Rv3684ko | 1.064 | 0.177 |
| delta_otsA_trehalose | -0.627 | 0.284 |