Top 10 genes with highest correlation to Rv0321/dcd:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3144c/PPE52 | (cc=0.5523) | info on Rv3144c/PPE52 |
| Rv0078A/- | (cc=0.4916) | info on Rv0078A/- |
| Rv0677c/mmpS5 | (cc=0.4824) | info on Rv0677c/mmpS5 |
| Rv2129c/- | (cc=0.4691) | info on Rv2129c/- |
| Rv0597c/- | (cc=0.4652) | info on Rv0597c/- |
| Rv1004c/- | (cc=0.4501) | info on Rv1004c/- |
| Rv0036c/- | (cc=0.4438) | info on Rv0036c/- |
| Rv1468c/PE_PGRS29 | (cc=0.4409) | info on Rv1468c/PE_PGRS29 |
| Rv0779c/- | (cc=0.4231) | info on Rv0779c/- |
| Rv2337c/- | (cc=0.4227) | info on Rv2337c/- |
Correlation of Rv0321/dcd with Rv1004c/-
Normalized LFCs for Rv0321/dcd:
(description and provenance of datasets)
| Rv0321/dcd | Rv1004c/- | |
| Fe_supp_jason_reseq | 0.129 | -0.445 |
| low_pH_jason_reseq | 0.279 | -0.674 |
| NO_jason_reseq | 0.36 | 0.039 |
| B6_jason_reseq | 0.064 | -0.394 |
| MHCII_jason_reseq | -0.094 | 0.324 |
| Isoniazid02 | 1.157 | -0.093 |
| Rifampicin4 | -0.498 | 0.165 |
| Ethambutol3 | 3.996 | 1.51 |
| Meropenem3 | 0.235 | 0.527 |
| Vancomycin16 | -0.639 | 0.379 |
| Rv2680_day32 | -1.689 | 0.138 |
| H37Rv_KO_MarP | -0.399 | 0.33 |
| hypoxia_3wks | -0.06 | 0.279 |
| hypoxia_6wks | -0.921 | -0.39 |
| glycerol | -0.127 | 0.714 |
| cholesterol | -1.382 | 0.292 |
| AJ | -0.091 | 0.81 |
| Bibs02 | -2.085 | 0.138 |
| Bibs02c | 0.015 | 0.493 |
| BL6 | -3.422 | -1.506 |
| BL6a | 0.36 | -0.036 |
| BXD01 | -0.02 | -0.184 |
| BXD010 | 1.263 | -0.421 |
| BXD011 | -0.574 | -0.985 |
| BXD03 | 0.041 | -0.423 |
| BXD04 | -0.42 | 0.212 |
| BXD05 | 0.525 | -0.41 |
| BXD06 | 0.225 | -0.718 |
| BXD07 | -0.344 | -0.274 |
| BXD08 | 0.19 | 0.151 |
| BXD09 | -0.033 | -1.141 |
| CAST | -0.529 | -0.232 |
| CCcont | -3.452 | -1.537 |
| DS01 | -0.729 | 0.429 |
| DS02 | 0.175 | 0.35 |
| DS04 | 1.276 | 1.043 |
| DS0c | -0.017 | -0.162 |
| GP01 | 0.997 | 0.82 |
| GP02 | 0.754 | 0.257 |
| GP0c | 3.766 | 0.349 |
| NOD | -0.537 | 0.013 |
| NZO | 0.35 | -0.863 |
| PWK | 0.186 | -0.402 |
| H37Rv_KO_CtpC | 2.004 | 0.048 |
| H37Rv_KO_CtpD | 1.539 | 0.852 |
| H37Rv_KO_Rv1272 | 0.558 | 0.042 |
| H37Rv_KO_SugABC | -1.572 | -0.087 |
| H37Rv_KO_MbtN | 0.232 | -0.348 |
| Trans05 | 0.543 | 0.422 |
| macrophage_unactivated | -1.162 | -1.032 |
| IL1 | -1.023 | -0.584 |
| Rapamycin | -1.059 | -1.132 |
| Tcell | -0.56 | -0.935 |
| GMCSF | -0.676 | -1.048 |
| IFNab | 2.234 | -1.56 |
| IFNg | -0.772 | -1.636 |
| IFNg_GMCSF1 | -1.618 | -1.477 |
| Rv1432_day32 | 0.074 | 0.799 |
| Rv1565c_day32 | -0.75 | -0.725 |
| secA2_input | 0.114 | -0.584 |
| delta_Rv3594 | 0.915 | -0.119 |
| delta_Rv3717 | 1.326 | 0.165 |
| delta_Rv3811 | 0.573 | 0.235 |
| delta_Rv0954 | 0.375 | 0.019 |
| PonA1 | 0.871 | -0.166 |
| EccD1_KO | -1.371 | -0.125 |
| EspI_KO | -2.108 | -0.054 |
| PE35_KO | -2.511 | -1.205 |
| PPE68_KO | -2.457 | -1.376 |
| glycerol2 | -2.35 | -0.448 |
| lignocerate | -2.811 | -0.492 |
| oleate | -0.967 | 0.539 |
| phosphatidylcholine | -2.025 | 0.09 |
| acetate | -2.864 | -0.637 |
| glucAc | -2.422 | -0.92 |
| Rv0950ko | -0.356 | -0.121 |
| Rv1096ko | 0.425 | -0.072 |
| Rv3684ko | 1.064 | -0.897 |
| delta_otsA_trehalose | -0.627 | -0.838 |