Top 10 genes with highest correlation to Rv0321/dcd:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3144c/PPE52 | (cc=0.5523) | info on Rv3144c/PPE52 |
| Rv0078A/- | (cc=0.4916) | info on Rv0078A/- |
| Rv0677c/mmpS5 | (cc=0.4824) | info on Rv0677c/mmpS5 |
| Rv2129c/- | (cc=0.4691) | info on Rv2129c/- |
| Rv0597c/- | (cc=0.4652) | info on Rv0597c/- |
| Rv1004c/- | (cc=0.4501) | info on Rv1004c/- |
| Rv0036c/- | (cc=0.4438) | info on Rv0036c/- |
| Rv1468c/PE_PGRS29 | (cc=0.4409) | info on Rv1468c/PE_PGRS29 |
| Rv0779c/- | (cc=0.4231) | info on Rv0779c/- |
| Rv2337c/- | (cc=0.4227) | info on Rv2337c/- |
Correlation of Rv0321/dcd with Rv0036c/-
Normalized LFCs for Rv0321/dcd:
(description and provenance of datasets)
| Rv0321/dcd | Rv0036c/- | |
| Fe_supp_jason_reseq | 0.129 | -0.346 |
| low_pH_jason_reseq | 0.279 | -1.297 |
| NO_jason_reseq | 0.36 | 0.202 |
| B6_jason_reseq | 0.064 | 0.25 |
| MHCII_jason_reseq | -0.094 | 0.134 |
| Isoniazid02 | 1.157 | 0.652 |
| Rifampicin4 | -0.498 | 0.717 |
| Ethambutol3 | 3.996 | 1.378 |
| Meropenem3 | 0.235 | 0.537 |
| Vancomycin16 | -0.639 | 0.873 |
| Rv2680_day32 | -1.689 | -3.314 |
| H37Rv_KO_MarP | -0.399 | 0.148 |
| hypoxia_3wks | -0.06 | 0.463 |
| hypoxia_6wks | -0.921 | -0.969 |
| glycerol | -0.127 | 1.205 |
| cholesterol | -1.382 | 0.106 |
| AJ | -0.091 | 0.304 |
| Bibs02 | -2.085 | 0.229 |
| Bibs02c | 0.015 | 0.653 |
| BL6 | -3.422 | -1.378 |
| BL6a | 0.36 | -0.296 |
| BXD01 | -0.02 | -1.055 |
| BXD010 | 1.263 | -1.216 |
| BXD011 | -0.574 | 0.465 |
| BXD03 | 0.041 | -1.212 |
| BXD04 | -0.42 | -0.4 |
| BXD05 | 0.525 | -0.13 |
| BXD06 | 0.225 | -0.199 |
| BXD07 | -0.344 | -0.133 |
| BXD08 | 0.19 | -0.436 |
| BXD09 | -0.033 | -0.657 |
| CAST | -0.529 | -0.901 |
| CCcont | -3.452 | -1.863 |
| DS01 | -0.729 | 0.375 |
| DS02 | 0.175 | 0.403 |
| DS04 | 1.276 | -0.18 |
| DS0c | -0.017 | -0.38 |
| GP01 | 0.997 | 1.587 |
| GP02 | 0.754 | 0.505 |
| GP0c | 3.766 | 0.469 |
| NOD | -0.537 | -0.633 |
| NZO | 0.35 | -0.22 |
| PWK | 0.186 | 0.47 |
| H37Rv_KO_CtpC | 2.004 | -0.298 |
| H37Rv_KO_CtpD | 1.539 | -0.256 |
| H37Rv_KO_Rv1272 | 0.558 | -0.716 |
| H37Rv_KO_SugABC | -1.572 | 0.088 |
| H37Rv_KO_MbtN | 0.232 | 0.111 |
| Trans05 | 0.543 | 0.164 |
| macrophage_unactivated | -1.162 | -0.3 |
| IL1 | -1.023 | -0.599 |
| Rapamycin | -1.059 | 0.681 |
| Tcell | -0.56 | -1.111 |
| GMCSF | -0.676 | 0.945 |
| IFNab | 2.234 | 0.033 |
| IFNg | -0.772 | -0.834 |
| IFNg_GMCSF1 | -1.618 | 0.493 |
| Rv1432_day32 | 0.074 | 0.379 |
| Rv1565c_day32 | -0.75 | 0.479 |
| secA2_input | 0.114 | 0.459 |
| delta_Rv3594 | 0.915 | 0.33 |
| delta_Rv3717 | 1.326 | 0.886 |
| delta_Rv3811 | 0.573 | -0.159 |
| delta_Rv0954 | 0.375 | 1.416 |
| PonA1 | 0.871 | 0.263 |
| EccD1_KO | -1.371 | -0.082 |
| EspI_KO | -2.108 | -1.112 |
| PE35_KO | -2.511 | 0.365 |
| PPE68_KO | -2.457 | 0.49 |
| glycerol2 | -2.35 | -0.376 |
| lignocerate | -2.811 | -1.436 |
| oleate | -0.967 | -0.451 |
| phosphatidylcholine | -2.025 | -0.784 |
| acetate | -2.864 | -2.018 |
| glucAc | -2.422 | -2.881 |
| Rv0950ko | -0.356 | 0.075 |
| Rv1096ko | 0.425 | -0.178 |
| Rv3684ko | 1.064 | 0.285 |
| delta_otsA_trehalose | -0.627 | 0.786 |