Top 10 genes with highest correlation to Rv0281/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3390/lpqD | (cc=0.5099) | info on Rv3390/lpqD |
| Rv1442/bisC | (cc=0.5028) | info on Rv1442/bisC |
| Rv3532/PPE61 | (cc=0.4856) | info on Rv3532/PPE61 |
| Rv0654/- | (cc=0.4727) | info on Rv0654/- |
| Rv3064c/- | (cc=0.4621) | info on Rv3064c/- |
| Rv1882c/- | (cc=0.4599) | info on Rv1882c/- |
| Rv2473/- | (cc=0.4552) | info on Rv2473/- |
| Rv0317c/glpQ2 | (cc=0.4425) | info on Rv0317c/glpQ2 |
| Rv0255c/cobQ1 | (cc=0.441) | info on Rv0255c/cobQ1 |
| Rv2351c/plcA | (cc=0.4358) | info on Rv2351c/plcA |
Correlation of Rv0281/- with Rv3532/PPE61
Normalized LFCs for Rv0281/-:
(description and provenance of datasets)
| Rv0281/- | Rv3532/PPE61 | |
| Fe_supp_jason_reseq | -0.451 | -0.058 |
| low_pH_jason_reseq | -1.598 | -0.79 |
| NO_jason_reseq | 0.249 | -0.194 |
| B6_jason_reseq | -0.917 | 0.706 |
| MHCII_jason_reseq | -0.72 | 0.622 |
| Isoniazid02 | 0.163 | 0.501 |
| Rifampicin4 | -0.525 | 0.019 |
| Ethambutol3 | 0.59 | 0.798 |
| Meropenem3 | 0.501 | 0.187 |
| Vancomycin16 | -0.157 | 0.204 |
| Rv2680_day32 | 0.399 | -0.116 |
| H37Rv_KO_MarP | 0.349 | 0.203 |
| hypoxia_3wks | -0.06 | 0.096 |
| hypoxia_6wks | -0.161 | -0.129 |
| glycerol | -0.019 | 0.334 |
| cholesterol | -0.593 | 0.284 |
| AJ | -0.057 | 0.05 |
| Bibs02 | 0.596 | 0.313 |
| Bibs02c | 0.881 | 0.371 |
| BL6 | -0.994 | 0.12 |
| BL6a | -0.059 | -0.014 |
| BXD01 | -0.496 | -0.209 |
| BXD010 | -1.004 | -0.409 |
| BXD011 | -0.433 | 0.005 |
| BXD03 | 0.213 | 0.054 |
| BXD04 | -0.067 | -0.004 |
| BXD05 | -0.08 | 0.371 |
| BXD06 | -0.843 | -0.348 |
| BXD07 | -0.557 | -0.241 |
| BXD08 | 0.025 | -0.537 |
| BXD09 | -0.606 | -0.257 |
| CAST | 0.0 | 0.452 |
| CCcont | -0.439 | -0.011 |
| DS01 | -0.253 | 0.435 |
| DS02 | -0.221 | 0.317 |
| DS04 | 0.645 | 0.357 |
| DS0c | 0.052 | 0.731 |
| GP01 | -0.455 | 0.479 |
| GP02 | 0.222 | 0.504 |
| GP0c | -0.333 | -0.254 |
| NOD | -0.705 | 0.049 |
| NZO | -0.831 | 0.238 |
| PWK | -0.328 | 0.267 |
| H37Rv_KO_CtpC | 0.092 | 0.344 |
| H37Rv_KO_CtpD | -0.584 | 0.176 |
| H37Rv_KO_Rv1272 | -0.618 | 0.169 |
| H37Rv_KO_SugABC | 0.796 | 0.239 |
| H37Rv_KO_MbtN | 0.272 | -0.361 |
| Trans05 | 0.012 | -0.31 |
| macrophage_unactivated | 0.202 | -0.417 |
| IL1 | -0.344 | -0.427 |
| Rapamycin | -0.028 | -0.282 |
| Tcell | 0.0 | -0.156 |
| GMCSF | 0.462 | -0.259 |
| IFNab | -0.172 | 0.203 |
| IFNg | -0.024 | -0.086 |
| IFNg_GMCSF1 | -0.211 | 0.132 |
| Rv1432_day32 | -0.317 | 1.514 |
| Rv1565c_day32 | 0.55 | 0.286 |
| secA2_input | -0.407 | -0.291 |
| delta_Rv3594 | -0.716 | -0.427 |
| delta_Rv3717 | -0.624 | -0.205 |
| delta_Rv3811 | -0.409 | -0.346 |
| delta_Rv0954 | -0.41 | -0.275 |
| PonA1 | -0.337 | -0.441 |
| EccD1_KO | -0.569 | -0.145 |
| EspI_KO | -1.494 | -0.465 |
| PE35_KO | -1.167 | -0.23 |
| PPE68_KO | -1.094 | -0.221 |
| glycerol2 | 0.646 | 0.907 |
| lignocerate | 0.549 | 0.6 |
| oleate | 0.846 | 0.818 |
| phosphatidylcholine | 0.843 | 0.605 |
| acetate | 0.037 | 0.038 |
| glucAc | -0.125 | 0.0 |
| Rv0950ko | -0.492 | 0.317 |
| Rv1096ko | -0.763 | 0.015 |
| Rv3684ko | -1.009 | -0.046 |
| delta_otsA_trehalose | 1.655 | 1.375 |