TnSeqCorr

Top 10 genes with highest correlation to Rv0281/-:

update plotcorrelationlink to info on gene
Rv3390/lpqD (cc=0.5099) info on Rv3390/lpqD
Rv1442/bisC (cc=0.5028) info on Rv1442/bisC
Rv3532/PPE61 (cc=0.4856) info on Rv3532/PPE61
Rv0654/- (cc=0.4727) info on Rv0654/-
Rv3064c/- (cc=0.4621) info on Rv3064c/-
Rv1882c/- (cc=0.4599) info on Rv1882c/-
Rv2473/- (cc=0.4552) info on Rv2473/-
Rv0317c/glpQ2 (cc=0.4425) info on Rv0317c/glpQ2
Rv0255c/cobQ1 (cc=0.441) info on Rv0255c/cobQ1
Rv2351c/plcA (cc=0.4358) info on Rv2351c/plcA

Correlation of Rv0281/- with Rv2351c/plcA

Normalized LFCs for Rv0281/-:
(description and provenance of datasets)
Rv0281/-Rv2351c/plcA
Fe_supp_jason_reseq

-0.451

0.699

low_pH_jason_reseq

-1.598

-1.404

NO_jason_reseq

0.249

-0.097

B6_jason_reseq

-0.917

0.563

MHCII_jason_reseq

-0.72

0.412

Isoniazid02

0.163

0.026

Rifampicin4

-0.525

0.108

Ethambutol3

0.59

0.972

Meropenem3

0.501

0.4

Vancomycin16

-0.157

-0.252

Rv2680_day32

0.399

-0.164

H37Rv_KO_MarP

0.349

-0.087

hypoxia_3wks

-0.06

-0.116

hypoxia_6wks

-0.161

-0.008

glycerol

-0.019

-0.183

cholesterol

-0.593

-0.153

AJ

-0.057

-0.096

Bibs02

0.596

0.142

Bibs02c

0.881

0.227

BL6

-0.994

-0.668

BL6a

-0.059

-0.327

BXD01

-0.496

-0.364

BXD010

-1.004

-0.452

BXD011

-0.433

-0.356

BXD03

0.213

0.006

BXD04

-0.067

-0.627

BXD05

-0.08

-0.163

BXD06

-0.843

-0.467

BXD07

-0.557

-0.537

BXD08

0.025

-0.5

BXD09

-0.606

-0.536

CAST

0.0

0.239

CCcont

-0.439

-0.433

DS01

-0.253

-0.005

DS02

-0.221

-0.126

DS04

0.645

-0.129

DS0c

0.052

0.009

GP01

-0.455

-0.208

GP02

0.222

0.134

GP0c

-0.333

-0.215

NOD

-0.705

0.443

NZO

-0.831

0.315

PWK

-0.328

0.234

H37Rv_KO_CtpC

0.092

-0.033

H37Rv_KO_CtpD

-0.584

0.209

H37Rv_KO_Rv1272

-0.618

0.019

H37Rv_KO_SugABC

0.796

0.002

H37Rv_KO_MbtN

0.272

0.729

Trans05

0.012

-0.348

macrophage_unactivated

0.202

-0.448

IL1

-0.344

-0.448

Rapamycin

-0.028

-0.411

Tcell

0.0

-0.795

GMCSF

0.462

-0.298

IFNab

-0.172

-0.405

IFNg

-0.024

0.083

IFNg_GMCSF1

-0.211

0.405

Rv1432_day32

-0.317

-0.116

Rv1565c_day32

0.55

0.054

secA2_input

-0.407

-0.346

delta_Rv3594

-0.716

0.164

delta_Rv3717

-0.624

-0.073

delta_Rv3811

-0.409

0.052

delta_Rv0954

-0.41

0.176

PonA1

-0.337

0.048

EccD1_KO

-0.569

-0.214

EspI_KO

-1.494

-0.553

PE35_KO

-1.167

-0.525

PPE68_KO

-1.094

-0.451

glycerol2

0.646

1.162

lignocerate

0.549

0.964

oleate

0.846

1.297

phosphatidylcholine

0.843

0.957

acetate

0.037

0.16

glucAc

-0.125

0.281

Rv0950ko

-0.492

0.317

Rv1096ko

-0.763

-0.561

Rv3684ko

-1.009

0.0

delta_otsA_trehalose

1.655

-0.197