Top 10 genes with highest correlation to Rv0270/fadD2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1151c/- | (cc=0.5714) | info on Rv1151c/- |
| Rv3220c/- | (cc=0.5348) | info on Rv3220c/- |
| Rv1626/- | (cc=0.5334) | info on Rv1626/- |
| Rv1206/fadD6 | (cc=0.5147) | info on Rv1206/fadD6 |
| Rv3136/PPE51 | (cc=0.5079) | info on Rv3136/PPE51 |
| Rv3135/PPE50 | (cc=0.4955) | info on Rv3135/PPE50 |
| Rv3696c/glpK | (cc=0.4457) | info on Rv3696c/glpK |
| Rv1308/atpA | (cc=0.4319) | info on Rv1308/atpA |
| Rv3376/- | (cc=0.4318) | info on Rv3376/- |
| Rv1472/echA12 | (cc=0.3948) | info on Rv1472/echA12 |
Correlation of Rv0270/fadD2 with Rv3220c/-
Normalized LFCs for Rv0270/fadD2:
(description and provenance of datasets)
| Rv0270/fadD2 | Rv3220c/- | |
| Fe_supp_jason_reseq | -0.101 | 0.335 |
| low_pH_jason_reseq | 3.232 | 3.333 |
| NO_jason_reseq | 2.494 | 2.103 |
| B6_jason_reseq | 2.248 | 0.869 |
| MHCII_jason_reseq | 0.04 | -3.58 |
| Isoniazid02 | 0.636 | 1.884 |
| Rifampicin4 | -1.386 | -2.819 |
| Ethambutol3 | 0.449 | -0.972 |
| Meropenem3 | 1.38 | 5.59 |
| Vancomycin16 | -1.841 | -5.064 |
| Rv2680_day32 | -0.947 | -0.672 |
| H37Rv_KO_MarP | 0.504 | -0.78 |
| hypoxia_3wks | -0.315 | -4.147 |
| hypoxia_6wks | 0.088 | -3.942 |
| glycerol | -0.537 | 0.892 |
| cholesterol | -0.447 | -0.31 |
| AJ | -1.007 | -1.457 |
| Bibs02 | -1.209 | -3.649 |
| Bibs02c | -1.206 | -3.363 |
| BL6 | -1.952 | -2.872 |
| BL6a | -1.322 | -2.369 |
| BXD01 | -0.959 | -0.493 |
| BXD010 | -0.36 | -0.787 |
| BXD011 | -0.722 | -0.648 |
| BXD03 | -0.661 | -1.948 |
| BXD04 | 0.454 | -0.288 |
| BXD05 | -1.065 | -2.264 |
| BXD06 | 1.015 | -0.311 |
| BXD07 | -1.061 | -1.497 |
| BXD08 | 0.061 | 0.137 |
| BXD09 | -1.184 | -0.985 |
| CAST | 0.073 | -1.029 |
| CCcont | -0.603 | -0.565 |
| DS01 | -1.122 | -2.171 |
| DS02 | -0.57 | -0.947 |
| DS04 | -0.669 | -2.571 |
| DS0c | -1.342 | -2.035 |
| GP01 | -1.771 | -2.686 |
| GP02 | -0.181 | -2.263 |
| GP0c | -2.397 | -3.537 |
| NOD | -0.631 | -1.142 |
| NZO | -0.228 | 0.091 |
| PWK | 1.631 | -1.628 |
| H37Rv_KO_CtpC | 0.593 | -0.953 |
| H37Rv_KO_CtpD | -0.718 | -1.545 |
| H37Rv_KO_Rv1272 | -1.653 | -2.97 |
| H37Rv_KO_SugABC | -0.592 | -2.086 |
| H37Rv_KO_MbtN | 0.186 | -1.657 |
| Trans05 | -0.682 | -2.416 |
| macrophage_unactivated | 0.729 | -2.011 |
| IL1 | -1.406 | -3.283 |
| Rapamycin | -1.139 | -3.397 |
| Tcell | 2.512 | 0.772 |
| GMCSF | -1.18 | -1.476 |
| IFNab | -1.515 | -2.44 |
| IFNg | -1.339 | -2.405 |
| IFNg_GMCSF1 | -0.314 | 0.0 |
| Rv1432_day32 | 0.868 | 0.415 |
| Rv1565c_day32 | -2.791 | 0.0 |
| secA2_input | -0.146 | 0.449 |
| delta_Rv3594 | -0.762 | -4.309 |
| delta_Rv3717 | -0.258 | -2.752 |
| delta_Rv3811 | -1.105 | -4.348 |
| delta_Rv0954 | 0.15 | -2.283 |
| PonA1 | -0.122 | -2.039 |
| EccD1_KO | -0.681 | -0.566 |
| EspI_KO | -0.314 | -0.376 |
| PE35_KO | -0.58 | 0.353 |
| PPE68_KO | -0.4 | 0.224 |
| glycerol2 | -2.532 | -1.813 |
| lignocerate | -1.584 | -2.53 |
| oleate | 4.242 | -0.856 |
| phosphatidylcholine | -2.389 | -2.504 |
| acetate | -0.364 | 0.843 |
| glucAc | -0.362 | 0.8 |
| Rv0950ko | -1.321 | 0.419 |
| Rv1096ko | -1.182 | -2.325 |
| Rv3684ko | 0.583 | 0.498 |
| delta_otsA_trehalose | -0.66 | 0.201 |