TnSeqCorr

Top 10 genes with highest correlation to Rv0251c/hsp:

update plotcorrelationlink to info on gene
Rv3638/- (cc=0.5184) info on Rv3638/-
Rv1735c/- (cc=0.4736) info on Rv1735c/-
Rv1989c/- (cc=0.4709) info on Rv1989c/-
Rv2624c/- (cc=0.4703) info on Rv2624c/-
Rv2081c/- (cc=0.4689) info on Rv2081c/-
Rv2913c/- (cc=0.4451) info on Rv2913c/-
Rv1135A/- (cc=0.4358) info on Rv1135A/-
Rv3655c/- (cc=0.429) info on Rv3655c/-
Rv2892c/PPE45 (cc=0.4286) info on Rv2892c/PPE45
Rv3121/cyp141 (cc=0.421) info on Rv3121/cyp141

Correlation of Rv0251c/hsp with Rv2913c/-

Normalized LFCs for Rv0251c/hsp:
(description and provenance of datasets)
Rv0251c/hspRv2913c/-
Fe_supp_jason_reseq

0.328

0.0

low_pH_jason_reseq

-0.586

-0.499

NO_jason_reseq

-1.284

-0.05

B6_jason_reseq

-0.009

-0.229

MHCII_jason_reseq

-0.393

0.627

Isoniazid02

0.812

0.138

Rifampicin4

-0.19

0.065

Ethambutol3

1.865

0.578

Meropenem3

0.073

0.344

Vancomycin16

1.525

0.371

Rv2680_day32

0.257

-0.857

H37Rv_KO_MarP

0.446

0.279

hypoxia_3wks

-0.191

0.0

hypoxia_6wks

0.745

0.257

glycerol

-2.785

-1.186

cholesterol

-1.503

-0.435

AJ

-1.331

-0.309

Bibs02

0.24

-0.266

Bibs02c

-0.591

-0.433

BL6

-1.494

-1.231

BL6a

-0.063

-0.798

BXD01

-0.286

-0.374

BXD010

-0.62

-0.421

BXD011

0.125

-0.573

BXD03

0.372

-0.247

BXD04

-0.034

-0.355

BXD05

0.299

-1.003

BXD06

-0.301

-0.736

BXD07

-0.861

-0.84

BXD08

-0.805

-0.557

BXD09

-0.474

-0.442

CAST

-0.138

-0.123

CCcont

-2.219

-0.905

DS01

-0.392

-0.4

DS02

0.547

-0.214

DS04

0.793

0.42

DS0c

0.196

-0.809

GP01

1.379

-0.23

GP02

-0.741

0.215

GP0c

-0.195

0.27

NOD

-0.325

-0.072

NZO

-0.98

-0.997

PWK

0.264

-0.31

H37Rv_KO_CtpC

0.361

-0.052

H37Rv_KO_CtpD

-0.15

-0.791

H37Rv_KO_Rv1272

0.688

-0.59

H37Rv_KO_SugABC

-0.191

-0.121

H37Rv_KO_MbtN

-0.373

-0.15

Trans05

0.979

0.369

macrophage_unactivated

0.496

-0.701

IL1

-0.789

-0.997

Rapamycin

-0.746

-0.819

Tcell

0.081

-0.655

GMCSF

-0.156

-0.1

IFNab

-0.426

-0.354

IFNg

0.436

-0.837

IFNg_GMCSF1

-1.005

-0.368

Rv1432_day32

-0.242

-0.096

Rv1565c_day32

0.433

-0.123

secA2_input

0.222

0.549

delta_Rv3594

-0.011

0.656

delta_Rv3717

-0.585

0.664

delta_Rv3811

0.021

0.512

delta_Rv0954

-0.22

1.123

PonA1

0.117

0.238

EccD1_KO

-0.622

0.28

EspI_KO

-0.682

0.063

PE35_KO

0.055

0.913

PPE68_KO

0.122

0.528

glycerol2

-0.022

-0.022

lignocerate

-0.535

-0.924

oleate

0.895

-0.145

phosphatidylcholine

-0.183

-0.297

acetate

-1.225

-0.69

glucAc

-2.441

-0.873

Rv0950ko

0.461

-0.184

Rv1096ko

0.41

0.293

Rv3684ko

0.521

0.065

delta_otsA_trehalose

1.537

0.159