TnSeqCorr

Top 10 genes with highest correlation to Rv0251c/hsp:

update plotcorrelationlink to info on gene
Rv3638/- (cc=0.5184) info on Rv3638/-
Rv1735c/- (cc=0.4736) info on Rv1735c/-
Rv1989c/- (cc=0.4709) info on Rv1989c/-
Rv2624c/- (cc=0.4703) info on Rv2624c/-
Rv2081c/- (cc=0.4689) info on Rv2081c/-
Rv2913c/- (cc=0.4451) info on Rv2913c/-
Rv1135A/- (cc=0.4358) info on Rv1135A/-
Rv3655c/- (cc=0.429) info on Rv3655c/-
Rv2892c/PPE45 (cc=0.4286) info on Rv2892c/PPE45
Rv3121/cyp141 (cc=0.421) info on Rv3121/cyp141

Correlation of Rv0251c/hsp with Rv1735c/-

Normalized LFCs for Rv0251c/hsp:
(description and provenance of datasets)
Rv0251c/hspRv1735c/-
Fe_supp_jason_reseq

0.328

-1.307

low_pH_jason_reseq

-0.586

-0.656

NO_jason_reseq

-1.284

0.118

B6_jason_reseq

-0.009

-1.084

MHCII_jason_reseq

-0.393

0.265

Isoniazid02

0.812

1.275

Rifampicin4

-0.19

0.501

Ethambutol3

1.865

0.916

Meropenem3

0.073

0.264

Vancomycin16

1.525

0.716

Rv2680_day32

0.257

0.0

H37Rv_KO_MarP

0.446

0.559

hypoxia_3wks

-0.191

0.578

hypoxia_6wks

0.745

-1.825

glycerol

-2.785

-1.444

cholesterol

-1.503

-1.572

AJ

-1.331

0.104

Bibs02

0.24

-0.66

Bibs02c

-0.591

-0.571

BL6

-1.494

-2.2

BL6a

-0.063

-2.426

BXD01

-0.286

-1.284

BXD010

-0.62

-2.074

BXD011

0.125

-1.905

BXD03

0.372

-1.656

BXD04

-0.034

0.0

BXD05

0.299

-1.264

BXD06

-0.301

-2.221

BXD07

-0.861

-2.304

BXD08

-0.805

-0.976

BXD09

-0.474

-1.64

CAST

-0.138

0.337

CCcont

-2.219

-2.554

DS01

-0.392

-0.703

DS02

0.547

0.928

DS04

0.793

1.665

DS0c

0.196

-0.102

GP01

1.379

1.249

GP02

-0.741

1.619

GP0c

-0.195

-0.126

NOD

-0.325

0.347

NZO

-0.98

-1.319

PWK

0.264

0.688

H37Rv_KO_CtpC

0.361

0.623

H37Rv_KO_CtpD

-0.15

-1.945

H37Rv_KO_Rv1272

0.688

0.834

H37Rv_KO_SugABC

-0.191

-0.844

H37Rv_KO_MbtN

-0.373

-1.715

Trans05

0.979

-0.114

macrophage_unactivated

0.496

-2.273

IL1

-0.789

-3.283

Rapamycin

-0.746

-3.069

Tcell

0.081

-2.076

GMCSF

-0.156

-2.778

IFNab

-0.426

-3.694

IFNg

0.436

-2.536

IFNg_GMCSF1

-1.005

-2.13

Rv1432_day32

-0.242

0.0

Rv1565c_day32

0.433

1.238

secA2_input

0.222

-0.429

delta_Rv3594

-0.011

-0.832

delta_Rv3717

-0.585

0.165

delta_Rv3811

0.021

-0.61

delta_Rv0954

-0.22

-1.499

PonA1

0.117

0.092

EccD1_KO

-0.622

0.793

EspI_KO

-0.682

-0.394

PE35_KO

0.055

0.435

PPE68_KO

0.122

1.901

glycerol2

-0.022

-0.787

lignocerate

-0.535

-1.162

oleate

0.895

-0.32

phosphatidylcholine

-0.183

-0.56

acetate

-1.225

-1.993

glucAc

-2.441

-2.721

Rv0950ko

0.461

1.001

Rv1096ko

0.41

1.454

Rv3684ko

0.521

1.15

delta_otsA_trehalose

1.537

0.564