Top 10 genes with highest correlation to Rv0245/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3261/fbiA | (cc=0.5779) | info on Rv3261/fbiA |
| Rv1638/uvrA | (cc=0.5592) | info on Rv1638/uvrA |
| Rv1364c/- | (cc=0.5287) | info on Rv1364c/- |
| Rv0003/recF | (cc=0.5149) | info on Rv0003/recF |
| Rv2737c/recA | (cc=0.5105) | info on Rv2737c/recA |
| Rv0324/- | (cc=0.5084) | info on Rv0324/- |
| Rv3270/ctpC | (cc=0.4926) | info on Rv3270/ctpC |
| Rv3417c/groEL1 | (cc=0.4919) | info on Rv3417c/groEL1 |
| Rv3269/- | (cc=0.488) | info on Rv3269/- |
| Rv2259/mscR | (cc=0.4857) | info on Rv2259/mscR |
Correlation of Rv0245/- with Rv3269/-
Normalized LFCs for Rv0245/-:
(description and provenance of datasets)
| Rv0245/- | Rv3269/- | |
| Fe_supp_jason_reseq | 2.145 | 2.502 |
| low_pH_jason_reseq | -0.592 | -0.811 |
| NO_jason_reseq | 1.005 | -1.273 |
| B6_jason_reseq | -1.334 | -0.119 |
| MHCII_jason_reseq | -0.804 | 0.189 |
| Isoniazid02 | 0.134 | 1.759 |
| Rifampicin4 | 0.91 | -0.523 |
| Ethambutol3 | -0.384 | -0.399 |
| Meropenem3 | 0.069 | -0.648 |
| Vancomycin16 | 1.677 | -1.995 |
| Rv2680_day32 | 1.357 | 0.0 |
| H37Rv_KO_MarP | -0.508 | -1.411 |
| hypoxia_3wks | -0.427 | -3.218 |
| hypoxia_6wks | -0.796 | -1.815 |
| glycerol | 2.836 | 0.0 |
| cholesterol | -0.132 | 2.81 |
| AJ | 0.983 | 1.425 |
| Bibs02 | -0.348 | 0.183 |
| Bibs02c | 0.629 | 0.0 |
| BL6 | 0.456 | 0.125 |
| BL6a | 1.679 | 1.897 |
| BXD01 | 1.457 | 1.247 |
| BXD010 | 0.871 | 0.128 |
| BXD011 | 1.306 | 0.987 |
| BXD03 | 0.92 | 0.475 |
| BXD04 | 1.184 | 0.0 |
| BXD05 | 1.032 | 0.135 |
| BXD06 | 1.57 | 0.366 |
| BXD07 | 1.668 | 0.851 |
| BXD08 | 0.564 | 0.133 |
| BXD09 | 1.941 | 0.943 |
| CAST | 0.192 | 0.439 |
| CCcont | 4.343 | 3.546 |
| DS01 | 1.261 | 1.451 |
| DS02 | 0.35 | 0.0 |
| DS04 | 2.389 | 0.822 |
| DS0c | 0.79 | 0.0 |
| GP01 | 0.159 | 0.0 |
| GP02 | -0.159 | 0.0 |
| GP0c | 1.151 | 0.0 |
| NOD | 0.0 | 0.0 |
| NZO | 0.727 | 0.701 |
| PWK | 0.315 | 0.374 |
| H37Rv_KO_CtpC | -0.148 | 2.984 |
| H37Rv_KO_CtpD | 0.676 | 0.537 |
| H37Rv_KO_Rv1272 | -0.269 | 0.141 |
| H37Rv_KO_SugABC | 2.205 | 1.066 |
| H37Rv_KO_MbtN | 0.603 | 1.109 |
| Trans05 | 0.698 | 0.249 |
| macrophage_unactivated | 1.098 | -0.275 |
| IL1 | -2.251 | -1.863 |
| Rapamycin | 0.0 | -1.188 |
| Tcell | -1.496 | -1.639 |
| GMCSF | 0.779 | -1.328 |
| IFNab | 0.193 | -0.547 |
| IFNg | -1.743 | -1.034 |
| IFNg_GMCSF1 | 1.093 | -2.407 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 2.829 | 1.895 |
| secA2_input | -1.007 | -1.691 |
| delta_Rv3594 | 1.504 | 2.951 |
| delta_Rv3717 | -1.058 | 2.246 |
| delta_Rv3811 | 0.983 | 2.342 |
| delta_Rv0954 | 1.292 | 0.391 |
| PonA1 | 1.549 | 1.1 |
| EccD1_KO | 0.112 | -1.825 |
| EspI_KO | 1.486 | -0.75 |
| PE35_KO | 2.529 | 0.548 |
| PPE68_KO | 1.475 | -0.618 |
| glycerol2 | -0.394 | -1.6 |
| lignocerate | -0.303 | -1.529 |
| oleate | -0.991 | -1.187 |
| phosphatidylcholine | -1.0 | -2.094 |
| acetate | 0.66 | -1.034 |
| glucAc | 0.793 | -0.899 |
| Rv0950ko | 0.03 | 0.862 |
| Rv1096ko | -0.838 | -1.559 |
| Rv3684ko | 0.612 | 0.0 |
| delta_otsA_trehalose | -0.11 | -0.204 |