Top 10 genes with highest correlation to Rv0235c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1058/fadD14 | (cc=0.5951) | info on Rv1058/fadD14 |
| Rv0973c/accA2 | (cc=0.5835) | info on Rv0973c/accA2 |
| Rv3148/nuoD | (cc=0.5759) | info on Rv3148/nuoD |
| Rv1831/- | (cc=0.5649) | info on Rv1831/- |
| Rv3112/moaD1 | (cc=0.5599) | info on Rv3112/moaD1 |
| Rv0742/PE_PGRS8 | (cc=0.5599) | info on Rv0742/PE_PGRS8 |
| Rv1914c/- | (cc=0.5571) | info on Rv1914c/- |
| Rv3511/PE_PGRS55 | (cc=0.5471) | info on Rv3511/PE_PGRS55 |
| Rv3176c/mesT | (cc=0.5412) | info on Rv3176c/mesT |
| Rv0644c/mmaA2 | (cc=0.541) | info on Rv0644c/mmaA2 |
Correlation of Rv0235c/- with Rv3511/PE_PGRS55
Normalized LFCs for Rv0235c/-:
(description and provenance of datasets)
| Rv0235c/- | Rv3511/PE_PGRS55 | |
| Fe_supp_jason_reseq | -0.783 | -0.718 |
| low_pH_jason_reseq | -0.204 | -0.269 |
| NO_jason_reseq | 0.0 | -0.278 |
| B6_jason_reseq | -0.687 | -0.682 |
| MHCII_jason_reseq | -0.63 | 0.111 |
| Isoniazid02 | 0.164 | -1.059 |
| Rifampicin4 | 0.0 | 0.444 |
| Ethambutol3 | 0.035 | -0.565 |
| Meropenem3 | 0.035 | -0.213 |
| Vancomycin16 | 0.0 | -0.348 |
| Rv2680_day32 | 0.105 | -0.922 |
| H37Rv_KO_MarP | 0.155 | 0.014 |
| hypoxia_3wks | 0.191 | -0.618 |
| hypoxia_6wks | -0.443 | -1.347 |
| glycerol | 0.075 | 0.686 |
| cholesterol | -0.055 | 0.429 |
| AJ | 0.086 | 0.844 |
| Bibs02 | -1.13 | -0.334 |
| Bibs02c | 0.039 | 0.685 |
| BL6 | 1.27 | -0.228 |
| BL6a | 1.072 | 0.321 |
| BXD01 | 1.126 | 0.31 |
| BXD010 | 0.904 | -0.196 |
| BXD011 | 0.508 | -0.297 |
| BXD03 | 1.42 | 1.067 |
| BXD04 | 1.098 | 0.287 |
| BXD05 | 0.447 | 0.589 |
| BXD06 | 0.863 | 0.178 |
| BXD07 | 1.406 | 0.41 |
| BXD08 | 0.874 | 0.632 |
| BXD09 | 0.578 | 0.287 |
| CAST | 0.205 | 0.075 |
| CCcont | 1.15 | -0.025 |
| DS01 | 0.044 | -0.866 |
| DS02 | -0.082 | -0.112 |
| DS04 | 0.394 | -0.083 |
| DS0c | -0.041 | -0.484 |
| GP01 | 1.319 | 0.579 |
| GP02 | 2.076 | 1.313 |
| GP0c | 0.788 | 0.699 |
| NOD | 0.866 | -0.322 |
| NZO | 0.212 | 1.052 |
| PWK | 0.571 | 0.374 |
| H37Rv_KO_CtpC | 1.221 | 0.561 |
| H37Rv_KO_CtpD | -0.661 | 0.302 |
| H37Rv_KO_Rv1272 | 0.451 | 0.058 |
| H37Rv_KO_SugABC | 1.891 | 0.649 |
| H37Rv_KO_MbtN | 0.462 | 0.319 |
| Trans05 | 1.231 | 1.249 |
| macrophage_unactivated | 0.805 | 0.073 |
| IL1 | 0.0 | -0.59 |
| Rapamycin | -0.592 | -0.611 |
| Tcell | 0.209 | -0.479 |
| GMCSF | 0.708 | 0.544 |
| IFNab | -0.756 | -0.683 |
| IFNg | -0.775 | -0.497 |
| IFNg_GMCSF1 | -0.666 | -0.421 |
| Rv1432_day32 | 1.25 | 1.036 |
| Rv1565c_day32 | 0.0 | -0.524 |
| secA2_input | -0.031 | 0.446 |
| delta_Rv3594 | 0.909 | -0.135 |
| delta_Rv3717 | 0.893 | -0.53 |
| delta_Rv3811 | 0.721 | -0.349 |
| delta_Rv0954 | 0.699 | -0.808 |
| PonA1 | 0.278 | 0.0 |
| EccD1_KO | 0.0 | 0.444 |
| EspI_KO | -0.419 | -0.225 |
| PE35_KO | -0.28 | -0.63 |
| PPE68_KO | 0.099 | -0.733 |
| glycerol2 | 1.1 | 0.248 |
| lignocerate | 0.956 | 0.342 |
| oleate | 0.719 | 0.166 |
| phosphatidylcholine | 0.634 | 0.221 |
| acetate | 0.459 | -0.057 |
| glucAc | 1.092 | -0.023 |
| Rv0950ko | -0.292 | 0.609 |
| Rv1096ko | -0.048 | 0.531 |
| Rv3684ko | -0.373 | -0.193 |
| delta_otsA_trehalose | -1.372 | -1.443 |