Top 10 genes with highest correlation to Rv0235c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1058/fadD14 | (cc=0.5951) | info on Rv1058/fadD14 |
| Rv0973c/accA2 | (cc=0.5835) | info on Rv0973c/accA2 |
| Rv3148/nuoD | (cc=0.5759) | info on Rv3148/nuoD |
| Rv1831/- | (cc=0.5649) | info on Rv1831/- |
| Rv3112/moaD1 | (cc=0.5599) | info on Rv3112/moaD1 |
| Rv0742/PE_PGRS8 | (cc=0.5599) | info on Rv0742/PE_PGRS8 |
| Rv1914c/- | (cc=0.5571) | info on Rv1914c/- |
| Rv3511/PE_PGRS55 | (cc=0.5471) | info on Rv3511/PE_PGRS55 |
| Rv3176c/mesT | (cc=0.5412) | info on Rv3176c/mesT |
| Rv0644c/mmaA2 | (cc=0.541) | info on Rv0644c/mmaA2 |
Correlation of Rv0235c/- with Rv1831/-
Normalized LFCs for Rv0235c/-:
(description and provenance of datasets)
| Rv0235c/- | Rv1831/- | |
| Fe_supp_jason_reseq | -0.783 | -0.275 |
| low_pH_jason_reseq | -0.204 | -0.952 |
| NO_jason_reseq | 0.0 | -0.68 |
| B6_jason_reseq | -0.687 | -1.36 |
| MHCII_jason_reseq | -0.63 | -0.162 |
| Isoniazid02 | 0.164 | 0.665 |
| Rifampicin4 | 0.0 | -0.531 |
| Ethambutol3 | 0.035 | 1.136 |
| Meropenem3 | 0.035 | 0.271 |
| Vancomycin16 | 0.0 | -0.355 |
| Rv2680_day32 | 0.105 | 0.69 |
| H37Rv_KO_MarP | 0.155 | -0.512 |
| hypoxia_3wks | 0.191 | 0.124 |
| hypoxia_6wks | -0.443 | 1.021 |
| glycerol | 0.075 | -0.11 |
| cholesterol | -0.055 | 0.052 |
| AJ | 0.086 | -0.613 |
| Bibs02 | -1.13 | -1.674 |
| Bibs02c | 0.039 | 0.349 |
| BL6 | 1.27 | 0.796 |
| BL6a | 1.072 | 1.37 |
| BXD01 | 1.126 | 2.036 |
| BXD010 | 0.904 | 0.407 |
| BXD011 | 0.508 | 1.379 |
| BXD03 | 1.42 | 1.217 |
| BXD04 | 1.098 | 1.986 |
| BXD05 | 0.447 | 1.501 |
| BXD06 | 0.863 | 1.635 |
| BXD07 | 1.406 | 1.565 |
| BXD08 | 0.874 | 2.417 |
| BXD09 | 0.578 | 1.261 |
| CAST | 0.205 | -0.087 |
| CCcont | 1.15 | 1.331 |
| DS01 | 0.044 | -0.349 |
| DS02 | -0.082 | -0.487 |
| DS04 | 0.394 | 1.148 |
| DS0c | -0.041 | 0.476 |
| GP01 | 1.319 | -0.413 |
| GP02 | 2.076 | 1.186 |
| GP0c | 0.788 | -0.086 |
| NOD | 0.866 | 1.302 |
| NZO | 0.212 | -1.05 |
| PWK | 0.571 | 0.198 |
| H37Rv_KO_CtpC | 1.221 | 0.72 |
| H37Rv_KO_CtpD | -0.661 | -0.09 |
| H37Rv_KO_Rv1272 | 0.451 | 1.759 |
| H37Rv_KO_SugABC | 1.891 | 1.836 |
| H37Rv_KO_MbtN | 0.462 | 1.611 |
| Trans05 | 1.231 | 1.252 |
| macrophage_unactivated | 0.805 | 0.568 |
| IL1 | 0.0 | -0.083 |
| Rapamycin | -0.592 | -0.439 |
| Tcell | 0.209 | 0.091 |
| GMCSF | 0.708 | 0.314 |
| IFNab | -0.756 | 0.689 |
| IFNg | -0.775 | 0.265 |
| IFNg_GMCSF1 | -0.666 | 0.547 |
| Rv1432_day32 | 1.25 | 1.313 |
| Rv1565c_day32 | 0.0 | -0.471 |
| secA2_input | -0.031 | -0.25 |
| delta_Rv3594 | 0.909 | -0.494 |
| delta_Rv3717 | 0.893 | 0.323 |
| delta_Rv3811 | 0.721 | -0.004 |
| delta_Rv0954 | 0.699 | -0.375 |
| PonA1 | 0.278 | -1.199 |
| EccD1_KO | 0.0 | 0.96 |
| EspI_KO | -0.419 | 0.414 |
| PE35_KO | -0.28 | -0.029 |
| PPE68_KO | 0.099 | 0.106 |
| glycerol2 | 1.1 | -0.263 |
| lignocerate | 0.956 | 0.145 |
| oleate | 0.719 | 0.424 |
| phosphatidylcholine | 0.634 | 0.326 |
| acetate | 0.459 | -0.8 |
| glucAc | 1.092 | -0.318 |
| Rv0950ko | -0.292 | -0.012 |
| Rv1096ko | -0.048 | -0.546 |
| Rv3684ko | -0.373 | -0.193 |
| delta_otsA_trehalose | -1.372 | -2.555 |