Top 10 genes with highest correlation to Rv0229c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0386/- | (cc=0.5902) | info on Rv0386/- |
| Rv0470A/- | (cc=0.5777) | info on Rv0470A/- |
| Rv0375c/- | (cc=0.5425) | info on Rv0375c/- |
| Rv3100c/smpB | (cc=0.5036) | info on Rv3100c/smpB |
| Rv2670c/- | (cc=0.5) | info on Rv2670c/- |
| Rv0959/- | (cc=0.4977) | info on Rv0959/- |
| Rv0271c/fadE6 | (cc=0.4674) | info on Rv0271c/fadE6 |
| Rv1192/- | (cc=0.4673) | info on Rv1192/- |
| Rv3655c/- | (cc=0.4653) | info on Rv3655c/- |
| Rv0233/nrdB | (cc=0.4631) | info on Rv0233/nrdB |
Correlation of Rv0229c/- with Rv0375c/-
Normalized LFCs for Rv0229c/-:
(description and provenance of datasets)
| Rv0229c/- | Rv0375c/- | |
| Fe_supp_jason_reseq | 0.813 | 0.428 |
| low_pH_jason_reseq | -0.32 | 0.238 |
| NO_jason_reseq | -0.184 | -0.717 |
| B6_jason_reseq | 1.177 | 2.377 |
| MHCII_jason_reseq | 0.76 | 1.581 |
| Isoniazid02 | 0.909 | 0.186 |
| Rifampicin4 | 0.225 | 0.59 |
| Ethambutol3 | 1.019 | 0.08 |
| Meropenem3 | 1.029 | 0.153 |
| Vancomycin16 | 0.31 | 0.257 |
| Rv2680_day32 | -0.057 | -1.97 |
| H37Rv_KO_MarP | 0.82 | 0.636 |
| hypoxia_3wks | -0.179 | 0.917 |
| hypoxia_6wks | -0.319 | -1.109 |
| glycerol | -0.538 | -0.671 |
| cholesterol | -0.273 | -0.12 |
| AJ | -0.313 | -0.929 |
| Bibs02 | 0.041 | -1.709 |
| Bibs02c | 1.122 | -0.564 |
| BL6 | 0.289 | -1.378 |
| BL6a | 0.354 | -0.453 |
| BXD01 | -0.479 | -0.552 |
| BXD010 | 0.217 | -1.984 |
| BXD011 | -0.998 | -1.05 |
| BXD03 | -0.36 | -0.896 |
| BXD04 | -1.112 | -1.42 |
| BXD05 | -0.695 | -1.063 |
| BXD06 | -0.629 | -0.925 |
| BXD07 | -0.464 | -0.689 |
| BXD08 | -0.805 | -1.406 |
| BXD09 | -0.324 | -1.11 |
| CAST | -0.08 | 0.34 |
| CCcont | -0.421 | -1.082 |
| DS01 | 0.423 | -0.115 |
| DS02 | 0.6 | -0.035 |
| DS04 | 0.5 | -0.126 |
| DS0c | -0.115 | -0.069 |
| GP01 | 0.177 | -0.226 |
| GP02 | -0.174 | -1.13 |
| GP0c | 0.233 | -0.35 |
| NOD | 0.708 | 3.03 |
| NZO | 0.308 | -1.15 |
| PWK | -0.523 | -0.449 |
| H37Rv_KO_CtpC | -0.652 | 0.026 |
| H37Rv_KO_CtpD | -0.435 | -0.567 |
| H37Rv_KO_Rv1272 | -0.387 | -1.022 |
| H37Rv_KO_SugABC | -0.599 | 1.391 |
| H37Rv_KO_MbtN | -0.886 | -1.75 |
| Trans05 | 0.406 | -0.201 |
| macrophage_unactivated | 1.758 | 1.97 |
| IL1 | 0.24 | 0.0 |
| Rapamycin | -0.11 | 0.353 |
| Tcell | 0.339 | 1.049 |
| GMCSF | -0.063 | -0.333 |
| IFNab | 0.574 | 1.116 |
| IFNg | 0.155 | -0.901 |
| IFNg_GMCSF1 | 0.597 | 1.442 |
| Rv1432_day32 | 0.403 | -0.18 |
| Rv1565c_day32 | -0.057 | -0.864 |
| secA2_input | -0.435 | 1.368 |
| delta_Rv3594 | -0.551 | -3.977 |
| delta_Rv3717 | -0.609 | -1.354 |
| delta_Rv3811 | -0.535 | -0.639 |
| delta_Rv0954 | 0.372 | -1.273 |
| PonA1 | -0.11 | -0.8 |
| EccD1_KO | 0.105 | 0.852 |
| EspI_KO | -0.416 | 0.448 |
| PE35_KO | -0.195 | -0.286 |
| PPE68_KO | -0.323 | -0.314 |
| glycerol2 | 0.376 | 0.0 |
| lignocerate | 0.078 | -0.413 |
| oleate | 0.163 | 0.522 |
| phosphatidylcholine | 0.031 | 0.157 |
| acetate | -0.667 | -0.768 |
| glucAc | -0.385 | -0.478 |
| Rv0950ko | 0.654 | 0.555 |
| Rv1096ko | 1.439 | 0.971 |
| Rv3684ko | 0.514 | 0.878 |
| delta_otsA_trehalose | -0.449 | -0.564 |