Top 10 genes with highest correlation to Rv0229c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0386/- | (cc=0.5902) | info on Rv0386/- |
| Rv0470A/- | (cc=0.5777) | info on Rv0470A/- |
| Rv0375c/- | (cc=0.5425) | info on Rv0375c/- |
| Rv3100c/smpB | (cc=0.5036) | info on Rv3100c/smpB |
| Rv2670c/- | (cc=0.5) | info on Rv2670c/- |
| Rv0959/- | (cc=0.4977) | info on Rv0959/- |
| Rv0271c/fadE6 | (cc=0.4674) | info on Rv0271c/fadE6 |
| Rv1192/- | (cc=0.4673) | info on Rv1192/- |
| Rv3655c/- | (cc=0.4653) | info on Rv3655c/- |
| Rv0233/nrdB | (cc=0.4631) | info on Rv0233/nrdB |
Correlation of Rv0229c/- with Rv0386/-
Normalized LFCs for Rv0229c/-:
(description and provenance of datasets)
| Rv0229c/- | Rv0386/- | |
| Fe_supp_jason_reseq | 0.813 | -0.396 |
| low_pH_jason_reseq | -0.32 | 0.064 |
| NO_jason_reseq | -0.184 | 0.234 |
| B6_jason_reseq | 1.177 | 1.913 |
| MHCII_jason_reseq | 0.76 | 0.462 |
| Isoniazid02 | 0.909 | 1.461 |
| Rifampicin4 | 0.225 | -0.106 |
| Ethambutol3 | 1.019 | 1.66 |
| Meropenem3 | 1.029 | 0.108 |
| Vancomycin16 | 0.31 | 0.202 |
| Rv2680_day32 | -0.057 | -0.185 |
| H37Rv_KO_MarP | 0.82 | 0.598 |
| hypoxia_3wks | -0.179 | 0.132 |
| hypoxia_6wks | -0.319 | 0.138 |
| glycerol | -0.538 | 0.01 |
| cholesterol | -0.273 | -0.205 |
| AJ | -0.313 | -0.101 |
| Bibs02 | 0.041 | 0.532 |
| Bibs02c | 1.122 | 0.226 |
| BL6 | 0.289 | 0.13 |
| BL6a | 0.354 | 0.056 |
| BXD01 | -0.479 | -0.611 |
| BXD010 | 0.217 | -0.231 |
| BXD011 | -0.998 | -0.35 |
| BXD03 | -0.36 | -0.092 |
| BXD04 | -1.112 | -0.627 |
| BXD05 | -0.695 | -0.377 |
| BXD06 | -0.629 | -0.451 |
| BXD07 | -0.464 | -0.449 |
| BXD08 | -0.805 | -0.485 |
| BXD09 | -0.324 | -0.343 |
| CAST | -0.08 | 0.776 |
| CCcont | -0.421 | -0.564 |
| DS01 | 0.423 | -0.272 |
| DS02 | 0.6 | 0.08 |
| DS04 | 0.5 | 0.167 |
| DS0c | -0.115 | -0.159 |
| GP01 | 0.177 | 0.302 |
| GP02 | -0.174 | 0.233 |
| GP0c | 0.233 | -0.325 |
| NOD | 0.708 | 0.47 |
| NZO | 0.308 | 0.41 |
| PWK | -0.523 | 0.236 |
| H37Rv_KO_CtpC | -0.652 | 0.491 |
| H37Rv_KO_CtpD | -0.435 | 0.12 |
| H37Rv_KO_Rv1272 | -0.387 | -0.611 |
| H37Rv_KO_SugABC | -0.599 | -0.024 |
| H37Rv_KO_MbtN | -0.886 | -0.606 |
| Trans05 | 0.406 | -0.063 |
| macrophage_unactivated | 1.758 | 0.42 |
| IL1 | 0.24 | -0.021 |
| Rapamycin | -0.11 | -0.129 |
| Tcell | 0.339 | 0.046 |
| GMCSF | -0.063 | 0.037 |
| IFNab | 0.574 | -0.215 |
| IFNg | 0.155 | 0.27 |
| IFNg_GMCSF1 | 0.597 | 0.088 |
| Rv1432_day32 | 0.403 | 0.441 |
| Rv1565c_day32 | -0.057 | -0.114 |
| secA2_input | -0.435 | 0.0 |
| delta_Rv3594 | -0.551 | -0.28 |
| delta_Rv3717 | -0.609 | 0.081 |
| delta_Rv3811 | -0.535 | -0.372 |
| delta_Rv0954 | 0.372 | -0.349 |
| PonA1 | -0.11 | 0.349 |
| EccD1_KO | 0.105 | 0.73 |
| EspI_KO | -0.416 | 0.251 |
| PE35_KO | -0.195 | 0.0 |
| PPE68_KO | -0.323 | -0.109 |
| glycerol2 | 0.376 | 0.136 |
| lignocerate | 0.078 | 0.229 |
| oleate | 0.163 | 0.422 |
| phosphatidylcholine | 0.031 | 0.148 |
| acetate | -0.667 | 0.05 |
| glucAc | -0.385 | -0.021 |
| Rv0950ko | 0.654 | 0.703 |
| Rv1096ko | 1.439 | 0.938 |
| Rv3684ko | 0.514 | 1.019 |
| delta_otsA_trehalose | -0.449 | 0.059 |