Top 10 genes with highest correlation to Rv0220/lipC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0822c/- | (cc=0.6166) | info on Rv0822c/- |
| Rv3675/- | (cc=0.5392) | info on Rv3675/- |
| Rv0222/echA1 | (cc=0.534) | info on Rv0222/echA1 |
| Rv3840/- | (cc=0.532) | info on Rv3840/- |
| Rv1517/- | (cc=0.5306) | info on Rv1517/- |
| Rv2443/dctA | (cc=0.5285) | info on Rv2443/dctA |
| Rv2584c/apt | (cc=0.5261) | info on Rv2584c/apt |
| Rv1720c/vapC12 | (cc=0.522) | info on Rv1720c/vapC12 |
| Rv2430c/PPE41 | (cc=0.5191) | info on Rv2430c/PPE41 |
| Rv3847/- | (cc=0.5191) | info on Rv3847/- |
Correlation of Rv0220/lipC with Rv2430c/PPE41
Normalized LFCs for Rv0220/lipC:
(description and provenance of datasets)
| Rv0220/lipC | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | -0.172 | -0.259 |
| low_pH_jason_reseq | -0.564 | -0.617 |
| NO_jason_reseq | -0.551 | -0.326 |
| B6_jason_reseq | -0.6 | -0.565 |
| MHCII_jason_reseq | -0.075 | -1.222 |
| Isoniazid02 | 0.143 | -0.362 |
| Rifampicin4 | -0.596 | -0.379 |
| Ethambutol3 | 0.452 | -0.539 |
| Meropenem3 | 0.041 | 0.604 |
| Vancomycin16 | -0.329 | -0.541 |
| Rv2680_day32 | -0.125 | -0.546 |
| H37Rv_KO_MarP | 0.301 | 0.78 |
| hypoxia_3wks | 0.195 | -0.016 |
| hypoxia_6wks | -0.106 | -0.558 |
| glycerol | 0.65 | -1.482 |
| cholesterol | 0.142 | -0.355 |
| AJ | 0.155 | 1.329 |
| Bibs02 | 1.02 | 0.293 |
| Bibs02c | -0.815 | -0.441 |
| BL6 | 0.304 | 2.014 |
| BL6a | -0.069 | 1.624 |
| BXD01 | 0.022 | 1.73 |
| BXD010 | 0.506 | 2.268 |
| BXD011 | 0.472 | 2.003 |
| BXD03 | 1.002 | 2.085 |
| BXD04 | 0.896 | 2.116 |
| BXD05 | 1.107 | 2.269 |
| BXD06 | 0.131 | 1.836 |
| BXD07 | 0.579 | 1.829 |
| BXD08 | 0.445 | 1.59 |
| BXD09 | 0.435 | 1.891 |
| CAST | 0.592 | 1.024 |
| CCcont | -0.279 | 1.659 |
| DS01 | 0.51 | 1.092 |
| DS02 | 0.247 | 0.558 |
| DS04 | 0.419 | 0.769 |
| DS0c | 0.179 | 0.509 |
| GP01 | 1.623 | 0.134 |
| GP02 | 1.416 | 2.462 |
| GP0c | 0.602 | 0.343 |
| NOD | 0.454 | 1.447 |
| NZO | -0.254 | 0.483 |
| PWK | 0.311 | 0.872 |
| H37Rv_KO_CtpC | -0.086 | 0.914 |
| H37Rv_KO_CtpD | 0.939 | 1.252 |
| H37Rv_KO_Rv1272 | 0.683 | 1.399 |
| H37Rv_KO_SugABC | 0.814 | 1.91 |
| H37Rv_KO_MbtN | -0.376 | 1.129 |
| Trans05 | -0.576 | 2.226 |
| macrophage_unactivated | 0.922 | 1.076 |
| IL1 | 0.142 | 0.125 |
| Rapamycin | -0.203 | 0.19 |
| Tcell | -0.052 | 0.094 |
| GMCSF | 0.842 | 0.636 |
| IFNab | 0.638 | 0.308 |
| IFNg | 0.331 | 0.537 |
| IFNg_GMCSF1 | 0.663 | 0.688 |
| Rv1432_day32 | 0.0 | -0.428 |
| Rv1565c_day32 | -0.823 | 0.782 |
| secA2_input | -0.817 | -0.891 |
| delta_Rv3594 | -0.242 | -0.571 |
| delta_Rv3717 | -0.307 | -1.178 |
| delta_Rv3811 | -0.299 | -0.265 |
| delta_Rv0954 | 0.227 | -1.172 |
| PonA1 | 0.084 | -0.066 |
| EccD1_KO | -0.628 | -0.625 |
| EspI_KO | -0.642 | -0.331 |
| PE35_KO | -0.362 | -0.726 |
| PPE68_KO | -0.889 | -0.701 |
| glycerol2 | 0.021 | -0.084 |
| lignocerate | -0.357 | -0.073 |
| oleate | 0.142 | 0.234 |
| phosphatidylcholine | -0.172 | 0.041 |
| acetate | -0.427 | 0.017 |
| glucAc | -0.523 | -0.627 |
| Rv0950ko | -0.314 | -0.136 |
| Rv1096ko | 0.235 | -0.22 |
| Rv3684ko | -0.94 | -0.508 |
| delta_otsA_trehalose | 0.317 | 1.428 |