Top 10 genes with highest correlation to Rv0220/lipC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0822c/- | (cc=0.6166) | info on Rv0822c/- |
| Rv3675/- | (cc=0.5392) | info on Rv3675/- |
| Rv0222/echA1 | (cc=0.534) | info on Rv0222/echA1 |
| Rv3840/- | (cc=0.532) | info on Rv3840/- |
| Rv1517/- | (cc=0.5306) | info on Rv1517/- |
| Rv2443/dctA | (cc=0.5285) | info on Rv2443/dctA |
| Rv2584c/apt | (cc=0.5261) | info on Rv2584c/apt |
| Rv1720c/vapC12 | (cc=0.522) | info on Rv1720c/vapC12 |
| Rv2430c/PPE41 | (cc=0.5191) | info on Rv2430c/PPE41 |
| Rv3847/- | (cc=0.5191) | info on Rv3847/- |
Correlation of Rv0220/lipC with Rv1720c/vapC12
Normalized LFCs for Rv0220/lipC:
(description and provenance of datasets)
| Rv0220/lipC | Rv1720c/vapC12 | |
| Fe_supp_jason_reseq | -0.172 | -0.63 |
| low_pH_jason_reseq | -0.564 | 0.211 |
| NO_jason_reseq | -0.551 | 0.215 |
| B6_jason_reseq | -0.6 | -1.346 |
| MHCII_jason_reseq | -0.075 | -0.986 |
| Isoniazid02 | 0.143 | -0.725 |
| Rifampicin4 | -0.596 | 0.436 |
| Ethambutol3 | 0.452 | -0.46 |
| Meropenem3 | 0.041 | 1.133 |
| Vancomycin16 | -0.329 | -0.504 |
| Rv2680_day32 | -0.125 | 0.249 |
| H37Rv_KO_MarP | 0.301 | 0.241 |
| hypoxia_3wks | 0.195 | -0.431 |
| hypoxia_6wks | -0.106 | -0.188 |
| glycerol | 0.65 | -0.252 |
| cholesterol | 0.142 | 1.058 |
| AJ | 0.155 | 0.306 |
| Bibs02 | 1.02 | 0.88 |
| Bibs02c | -0.815 | -0.206 |
| BL6 | 0.304 | 0.346 |
| BL6a | -0.069 | 0.512 |
| BXD01 | 0.022 | 0.407 |
| BXD010 | 0.506 | 0.842 |
| BXD011 | 0.472 | 0.83 |
| BXD03 | 1.002 | 0.838 |
| BXD04 | 0.896 | -0.31 |
| BXD05 | 1.107 | 0.489 |
| BXD06 | 0.131 | 0.12 |
| BXD07 | 0.579 | 0.812 |
| BXD08 | 0.445 | -0.374 |
| BXD09 | 0.435 | 0.942 |
| CAST | 0.592 | 0.232 |
| CCcont | -0.279 | 0.359 |
| DS01 | 0.51 | 0.263 |
| DS02 | 0.247 | 0.44 |
| DS04 | 0.419 | 1.072 |
| DS0c | 0.179 | -0.577 |
| GP01 | 1.623 | 1.028 |
| GP02 | 1.416 | 1.083 |
| GP0c | 0.602 | -0.095 |
| NOD | 0.454 | 1.012 |
| NZO | -0.254 | -0.965 |
| PWK | 0.311 | 0.76 |
| H37Rv_KO_CtpC | -0.086 | 1.214 |
| H37Rv_KO_CtpD | 0.939 | -0.093 |
| H37Rv_KO_Rv1272 | 0.683 | 0.547 |
| H37Rv_KO_SugABC | 0.814 | 1.782 |
| H37Rv_KO_MbtN | -0.376 | 0.357 |
| Trans05 | -0.576 | -0.516 |
| macrophage_unactivated | 0.922 | 0.164 |
| IL1 | 0.142 | -0.08 |
| Rapamycin | -0.203 | 0.89 |
| Tcell | -0.052 | 0.834 |
| GMCSF | 0.842 | 1.861 |
| IFNab | 0.638 | 0.638 |
| IFNg | 0.331 | 1.702 |
| IFNg_GMCSF1 | 0.663 | 0.877 |
| Rv1432_day32 | 0.0 | 0.15 |
| Rv1565c_day32 | -0.823 | -1.066 |
| secA2_input | -0.817 | -0.609 |
| delta_Rv3594 | -0.242 | 0.084 |
| delta_Rv3717 | -0.307 | -0.559 |
| delta_Rv3811 | -0.299 | -0.293 |
| delta_Rv0954 | 0.227 | -0.133 |
| PonA1 | 0.084 | 0.312 |
| EccD1_KO | -0.628 | -2.065 |
| EspI_KO | -0.642 | 0.234 |
| PE35_KO | -0.362 | -1.05 |
| PPE68_KO | -0.889 | -1.152 |
| glycerol2 | 0.021 | -0.653 |
| lignocerate | -0.357 | 0.209 |
| oleate | 0.142 | -1.093 |
| phosphatidylcholine | -0.172 | -0.784 |
| acetate | -0.427 | -0.057 |
| glucAc | -0.523 | 0.751 |
| Rv0950ko | -0.314 | -0.781 |
| Rv1096ko | 0.235 | -0.467 |
| Rv3684ko | -0.94 | -1.074 |
| delta_otsA_trehalose | 0.317 | -0.4 |