Top 10 genes with highest correlation to Rv0219/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2385/mbtJ | (cc=0.5495) | info on Rv2385/mbtJ |
| Rv0218/- | (cc=0.4856) | info on Rv0218/- |
| Rv1184c/- | (cc=0.4805) | info on Rv1184c/- |
| Rv0741/- | (cc=0.4712) | info on Rv0741/- |
| Rv1247c/relB | (cc=0.4633) | info on Rv1247c/relB |
| Rv1185c/fadD21 | (cc=0.4633) | info on Rv1185c/fadD21 |
| Rv2627c/- | (cc=0.4611) | info on Rv2627c/- |
| Rv3635/- | (cc=0.4598) | info on Rv3635/- |
| Rv1075c/- | (cc=0.4525) | info on Rv1075c/- |
| Rv2081c/- | (cc=0.4451) | info on Rv2081c/- |
Correlation of Rv0219/- with Rv3635/-
Normalized LFCs for Rv0219/-:
(description and provenance of datasets)
| Rv0219/- | Rv3635/- | |
| Fe_supp_jason_reseq | 1.02 | 0.442 |
| low_pH_jason_reseq | -1.032 | 0.167 |
| NO_jason_reseq | -0.659 | 0.507 |
| B6_jason_reseq | 0.803 | 0.311 |
| MHCII_jason_reseq | 0.838 | 0.926 |
| Isoniazid02 | 0.821 | 0.0 |
| Rifampicin4 | 0.609 | 0.0 |
| Ethambutol3 | 0.547 | 0.168 |
| Meropenem3 | 0.14 | 0.165 |
| Vancomycin16 | 0.645 | 0.0 |
| Rv2680_day32 | 1.215 | 0.0 |
| H37Rv_KO_MarP | 0.423 | -0.162 |
| hypoxia_3wks | 0.494 | 0.0 |
| hypoxia_6wks | -0.908 | -0.43 |
| glycerol | -0.099 | 0.086 |
| cholesterol | -0.226 | -0.203 |
| AJ | -0.38 | -0.698 |
| Bibs02 | 0.062 | -1.031 |
| Bibs02c | -0.446 | 0.414 |
| BL6 | -0.823 | -1.144 |
| BL6a | -0.34 | -0.377 |
| BXD01 | -0.516 | -1.062 |
| BXD010 | -0.52 | -0.629 |
| BXD011 | 0.034 | -1.039 |
| BXD03 | 0.239 | -1.237 |
| BXD04 | -0.913 | -0.896 |
| BXD05 | 0.447 | -0.863 |
| BXD06 | -0.746 | -0.967 |
| BXD07 | -0.455 | -1.003 |
| BXD08 | -0.175 | -0.75 |
| BXD09 | -0.63 | -1.018 |
| CAST | 0.684 | 0.284 |
| CCcont | -0.982 | -1.366 |
| DS01 | 0.614 | -0.45 |
| DS02 | 0.334 | -0.304 |
| DS04 | -0.974 | -0.271 |
| DS0c | 0.226 | 0.0 |
| GP01 | -1.948 | -0.633 |
| GP02 | 0.815 | -0.761 |
| GP0c | -0.924 | -1.19 |
| NOD | 0.679 | -0.428 |
| NZO | 0.184 | -0.6 |
| PWK | 0.193 | -0.706 |
| H37Rv_KO_CtpC | -1.757 | -1.041 |
| H37Rv_KO_CtpD | 0.638 | -0.622 |
| H37Rv_KO_Rv1272 | -0.197 | 0.469 |
| H37Rv_KO_SugABC | -0.476 | -0.906 |
| H37Rv_KO_MbtN | 0.279 | -0.437 |
| Trans05 | 0.053 | -1.195 |
| macrophage_unactivated | -1.382 | -0.83 |
| IL1 | 0.658 | -0.374 |
| Rapamycin | 0.273 | -0.807 |
| Tcell | -1.326 | -0.411 |
| GMCSF | -0.415 | -0.694 |
| IFNab | -0.475 | -0.795 |
| IFNg | -0.094 | -0.337 |
| IFNg_GMCSF1 | -0.258 | 0.0 |
| Rv1432_day32 | -0.898 | -0.884 |
| Rv1565c_day32 | 0.379 | 1.339 |
| secA2_input | -0.512 | -1.943 |
| delta_Rv3594 | 0.381 | 0.828 |
| delta_Rv3717 | 0.678 | 0.0 |
| delta_Rv3811 | 0.773 | -0.205 |
| delta_Rv0954 | 0.966 | -0.178 |
| PonA1 | 2.008 | 0.624 |
| EccD1_KO | -1.546 | -0.816 |
| EspI_KO | -1.101 | -1.258 |
| PE35_KO | 0.248 | -0.723 |
| PPE68_KO | -0.464 | -0.793 |
| glycerol2 | 0.076 | -1.208 |
| lignocerate | -0.51 | -1.218 |
| oleate | 0.845 | -0.588 |
| phosphatidylcholine | -0.144 | -1.032 |
| acetate | -0.075 | -1.433 |
| glucAc | -1.35 | -1.034 |
| Rv0950ko | 0.395 | -0.582 |
| Rv1096ko | 0.353 | -0.28 |
| Rv3684ko | 0.472 | 0.285 |
| delta_otsA_trehalose | -0.899 | 0.0 |