Top 10 genes with highest correlation to Rv0219/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2385/mbtJ | (cc=0.5495) | info on Rv2385/mbtJ |
| Rv0218/- | (cc=0.4856) | info on Rv0218/- |
| Rv1184c/- | (cc=0.4805) | info on Rv1184c/- |
| Rv0741/- | (cc=0.4712) | info on Rv0741/- |
| Rv1247c/relB | (cc=0.4633) | info on Rv1247c/relB |
| Rv1185c/fadD21 | (cc=0.4633) | info on Rv1185c/fadD21 |
| Rv2627c/- | (cc=0.4611) | info on Rv2627c/- |
| Rv3635/- | (cc=0.4598) | info on Rv3635/- |
| Rv1075c/- | (cc=0.4525) | info on Rv1075c/- |
| Rv2081c/- | (cc=0.4451) | info on Rv2081c/- |
Correlation of Rv0219/- with Rv0218/-
Normalized LFCs for Rv0219/-:
(description and provenance of datasets)
| Rv0219/- | Rv0218/- | |
| Fe_supp_jason_reseq | 1.02 | 0.434 |
| low_pH_jason_reseq | -1.032 | -0.201 |
| NO_jason_reseq | -0.659 | 0.0 |
| B6_jason_reseq | 0.803 | 0.84 |
| MHCII_jason_reseq | 0.838 | 1.098 |
| Isoniazid02 | 0.821 | 1.369 |
| Rifampicin4 | 0.609 | 0.582 |
| Ethambutol3 | 0.547 | 0.991 |
| Meropenem3 | 0.14 | 0.0 |
| Vancomycin16 | 0.645 | 0.658 |
| Rv2680_day32 | 1.215 | -0.208 |
| H37Rv_KO_MarP | 0.423 | 0.203 |
| hypoxia_3wks | 0.494 | 0.251 |
| hypoxia_6wks | -0.908 | 0.106 |
| glycerol | -0.099 | 1.104 |
| cholesterol | -0.226 | 0.912 |
| AJ | -0.38 | 0.734 |
| Bibs02 | 0.062 | 0.09 |
| Bibs02c | -0.446 | 0.537 |
| BL6 | -0.823 | -0.272 |
| BL6a | -0.34 | 0.043 |
| BXD01 | -0.516 | -0.43 |
| BXD010 | -0.52 | -0.722 |
| BXD011 | 0.034 | 0.009 |
| BXD03 | 0.239 | -0.419 |
| BXD04 | -0.913 | -0.445 |
| BXD05 | 0.447 | 0.322 |
| BXD06 | -0.746 | -0.467 |
| BXD07 | -0.455 | -0.416 |
| BXD08 | -0.175 | -0.4 |
| BXD09 | -0.63 | -0.343 |
| CAST | 0.684 | 0.385 |
| CCcont | -0.982 | -0.716 |
| DS01 | 0.614 | 0.245 |
| DS02 | 0.334 | 0.792 |
| DS04 | -0.974 | 0.95 |
| DS0c | 0.226 | 0.641 |
| GP01 | -1.948 | -1.051 |
| GP02 | 0.815 | 0.232 |
| GP0c | -0.924 | -0.537 |
| NOD | 0.679 | 0.747 |
| NZO | 0.184 | -0.15 |
| PWK | 0.193 | 0.735 |
| H37Rv_KO_CtpC | -1.757 | -0.473 |
| H37Rv_KO_CtpD | 0.638 | -0.762 |
| H37Rv_KO_Rv1272 | -0.197 | 0.484 |
| H37Rv_KO_SugABC | -0.476 | 0.485 |
| H37Rv_KO_MbtN | 0.279 | -0.703 |
| Trans05 | 0.053 | -0.485 |
| macrophage_unactivated | -1.382 | -1.209 |
| IL1 | 0.658 | -0.11 |
| Rapamycin | 0.273 | -0.592 |
| Tcell | -1.326 | -0.811 |
| GMCSF | -0.415 | -0.296 |
| IFNab | -0.475 | -0.499 |
| IFNg | -0.094 | 0.187 |
| IFNg_GMCSF1 | -0.258 | -0.075 |
| Rv1432_day32 | -0.898 | 0.439 |
| Rv1565c_day32 | 0.379 | 1.077 |
| secA2_input | -0.512 | -0.421 |
| delta_Rv3594 | 0.381 | -0.272 |
| delta_Rv3717 | 0.678 | -0.152 |
| delta_Rv3811 | 0.773 | -0.18 |
| delta_Rv0954 | 0.966 | 0.469 |
| PonA1 | 2.008 | 0.372 |
| EccD1_KO | -1.546 | -0.365 |
| EspI_KO | -1.101 | -0.228 |
| PE35_KO | 0.248 | 0.193 |
| PPE68_KO | -0.464 | -0.221 |
| glycerol2 | 0.076 | -0.433 |
| lignocerate | -0.51 | -0.61 |
| oleate | 0.845 | 0.231 |
| phosphatidylcholine | -0.144 | -0.364 |
| acetate | -0.075 | -0.653 |
| glucAc | -1.35 | -0.818 |
| Rv0950ko | 0.395 | 0.0 |
| Rv1096ko | 0.353 | -0.271 |
| Rv3684ko | 0.472 | -0.295 |
| delta_otsA_trehalose | -0.899 | -0.376 |