Top 10 genes with highest correlation to Rv0184/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3922c/- | (cc=0.5587) | info on Rv3922c/- |
Rv3770B/- | (cc=0.5035) | info on Rv3770B/- |
Rv0309/- | (cc=0.4897) | info on Rv0309/- |
Rv0821c/phoY2 | (cc=0.4753) | info on Rv0821c/phoY2 |
Rv2179c/- | (cc=0.4613) | info on Rv2179c/- |
Rv0905/echA6 | (cc=0.4519) | info on Rv0905/echA6 |
Rv2731/- | (cc=0.4471) | info on Rv2731/- |
Rv1712/cmk | (cc=0.4354) | info on Rv1712/cmk |
Rv0179c/lprO | (cc=0.4326) | info on Rv0179c/lprO |
Rv3719/- | (cc=0.4322) | info on Rv3719/- |
Correlation of Rv0184/- with Rv0309/-
Normalized LFCs for Rv0184/-:
(description and provenance of datasets)
Rv0184/- | Rv0309/- | |
Fe_supp_jason_reseq | -0.481 | -1.236 |
low_pH_jason_reseq | 0.468 | -1.338 |
NO_jason_reseq | 0.425 | -0.079 |
B6_jason_reseq | -0.988 | -0.814 |
MHCII_jason_reseq | -0.623 | -1.617 |
Isoniazid02 | 0.269 | -0.713 |
Rifampicin4 | -0.639 | -3.493 |
Ethambutol3 | 1.13 | 1.936 |
Meropenem3 | 1.313 | 1.336 |
Vancomycin16 | -0.881 | -0.698 |
Rv2680_day32 | 0.849 | 1.423 |
H37Rv_KO_MarP | 0.502 | -2.34 |
hypoxia_3wks | -1.017 | -0.682 |
hypoxia_6wks | -0.666 | -0.052 |
glycerol | 1.448 | -0.889 |
cholesterol | 0.083 | 0.734 |
AJ | -0.176 | 0.074 |
Bibs02 | 1.351 | 0.964 |
Bibs02c | 0.835 | 0.696 |
BL6 | 0.719 | 1.436 |
BL6a | 1.376 | 1.986 |
BXD01 | 1.114 | 1.759 |
BXD010 | 1.26 | 2.381 |
BXD011 | 1.352 | 1.917 |
BXD03 | 0.919 | 1.948 |
BXD04 | 1.05 | 2.591 |
BXD05 | 0.715 | 2.955 |
BXD06 | 1.159 | 2.962 |
BXD07 | 1.212 | 2.077 |
BXD08 | 1.846 | 1.625 |
BXD09 | 0.932 | 1.995 |
CAST | 2.087 | 1.026 |
CCcont | 0.487 | 1.276 |
DS01 | 1.234 | 1.027 |
DS02 | 0.996 | 0.069 |
DS04 | 0.436 | 1.023 |
DS0c | 0.435 | 0.748 |
GP01 | 0.0 | 1.221 |
GP02 | 0.42 | -0.366 |
GP0c | 0.942 | 1.074 |
NOD | 0.28 | 0.107 |
NZO | 0.376 | 0.0 |
PWK | 0.32 | 2.842 |
H37Rv_KO_CtpC | -0.149 | 0.671 |
H37Rv_KO_CtpD | -0.793 | 0.1 |
H37Rv_KO_Rv1272 | 0.23 | 1.806 |
H37Rv_KO_SugABC | 1.122 | 0.955 |
H37Rv_KO_MbtN | 1.02 | 0.738 |
Trans05 | 1.461 | 1.373 |
macrophage_unactivated | 0.562 | 0.129 |
IL1 | 1.382 | 0.0 |
Rapamycin | 0.902 | 0.126 |
Tcell | 1.476 | 0.541 |
GMCSF | 1.605 | 0.438 |
IFNab | 0.396 | 0.747 |
IFNg | 0.35 | 0.267 |
IFNg_GMCSF1 | 1.54 | 0.694 |
Rv1432_day32 | 0.926 | 1.09 |
Rv1565c_day32 | 0.049 | 0.603 |
secA2_input | -0.08 | -1.774 |
delta_Rv3594 | 0.061 | 0.375 |
delta_Rv3717 | 0.099 | 0.993 |
delta_Rv3811 | 0.309 | 0.479 |
delta_Rv0954 | -1.07 | -0.041 |
PonA1 | 0.27 | -0.826 |
EccD1_KO | 0.237 | -0.562 |
EspI_KO | -0.034 | -0.57 |
PE35_KO | -0.257 | -0.379 |
PPE68_KO | 0.483 | 0.08 |
glycerol2 | -0.132 | 0.149 |
lignocerate | -0.095 | 0.324 |
oleate | 0.224 | 0.75 |
phosphatidylcholine | -0.373 | -0.426 |
acetate | -0.239 | 0.879 |
glucAc | 0.149 | 0.227 |
Rv0950ko | 0.832 | -1.089 |
Rv1096ko | 1.028 | -0.109 |
Rv3684ko | 2.351 | 0.337 |
delta_otsA_trehalose | -0.57 | -0.116 |