Top 10 genes with highest correlation to Rv0180c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3283/sseA | (cc=0.7268) | info on Rv3283/sseA |
| Rv0411c/glnH | (cc=0.7034) | info on Rv0411c/glnH |
| Rv2844/- | (cc=0.6519) | info on Rv2844/- |
| Rv0410c/pknG | (cc=0.6418) | info on Rv0410c/pknG |
| Rv0412c/- | (cc=0.623) | info on Rv0412c/- |
| Rv2130c/mshC | (cc=0.5752) | info on Rv2130c/mshC |
| Rv1388/mihF | (cc=0.5682) | info on Rv1388/mihF |
| Rv1436/gap | (cc=0.5482) | info on Rv1436/gap |
| Rv1002c/- | (cc=0.5434) | info on Rv1002c/- |
| Rv2507/- | (cc=0.5377) | info on Rv2507/- |
Correlation of Rv0180c/- with Rv3283/sseA
Normalized LFCs for Rv0180c/-:
(description and provenance of datasets)
| Rv0180c/- | Rv3283/sseA | |
| Fe_supp_jason_reseq | 1.796 | 3.375 |
| low_pH_jason_reseq | 0.0 | -0.979 |
| NO_jason_reseq | 0.0 | -1.173 |
| B6_jason_reseq | 0.0 | -0.649 |
| MHCII_jason_reseq | 0.0 | 0.406 |
| Isoniazid02 | -1.101 | -1.008 |
| Rifampicin4 | -2.762 | -2.258 |
| Ethambutol3 | -0.761 | -1.254 |
| Meropenem3 | -2.105 | -2.709 |
| Vancomycin16 | -1.499 | -2.735 |
| Rv2680_day32 | 0.0 | -2.317 |
| H37Rv_KO_MarP | -3.151 | -1.319 |
| hypoxia_3wks | 0.0 | -2.181 |
| hypoxia_6wks | 0.0 | -1.934 |
| glycerol | 4.308 | 3.882 |
| cholesterol | 3.09 | 6.0 |
| AJ | 0.0 | -1.793 |
| Bibs02 | 0.0 | -0.796 |
| Bibs02c | 0.735 | 0.235 |
| BL6 | 0.0 | -1.937 |
| BL6a | 0.0 | -0.725 |
| BXD01 | 0.0 | -1.887 |
| BXD010 | 0.0 | -1.856 |
| BXD011 | 0.0 | -1.346 |
| BXD03 | 0.0 | -2.094 |
| BXD04 | 0.0 | -1.915 |
| BXD05 | 0.0 | -1.95 |
| BXD06 | 0.0 | -2.067 |
| BXD07 | 0.0 | -2.006 |
| BXD08 | 0.0 | -1.927 |
| BXD09 | 0.0 | -2.176 |
| CAST | 0.439 | 0.537 |
| CCcont | 0.0 | 0.199 |
| DS01 | 3.713 | 2.616 |
| DS02 | 0.597 | 0.852 |
| DS04 | 0.533 | 1.186 |
| DS0c | 1.788 | 2.855 |
| GP01 | 0.0 | -1.529 |
| GP02 | 0.0 | -1.289 |
| GP0c | 0.0 | -2.014 |
| NOD | 0.952 | 0.952 |
| NZO | 0.0 | -1.542 |
| PWK | 0.0 | -0.59 |
| H37Rv_KO_CtpC | 0.162 | 0.554 |
| H37Rv_KO_CtpD | 0.0 | -0.229 |
| H37Rv_KO_Rv1272 | 0.0 | -0.956 |
| H37Rv_KO_SugABC | 0.0 | -0.926 |
| H37Rv_KO_MbtN | 0.283 | -0.797 |
| Trans05 | 0.0 | -1.893 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.0 | -0.955 |
| Rapamycin | 0.0 | -1.372 |
| Tcell | 0.0 | -1.049 |
| GMCSF | 0.0 | -1.18 |
| IFNab | 0.0 | -1.351 |
| IFNg | 0.0 | -1.195 |
| IFNg_GMCSF1 | 0.0 | -1.405 |
| Rv1432_day32 | 0.0 | -0.999 |
| Rv1565c_day32 | 0.0 | 1.848 |
| secA2_input | -0.221 | 0.881 |
| delta_Rv3594 | -0.211 | -0.569 |
| delta_Rv3717 | -0.174 | -1.432 |
| delta_Rv3811 | -0.205 | -1.487 |
| delta_Rv0954 | 0.163 | 3.34 |
| PonA1 | 2.587 | 4.717 |
| EccD1_KO | 0.0 | 1.085 |
| EspI_KO | 0.0 | 0.665 |
| PE35_KO | 5.507 | 4.078 |
| PPE68_KO | 3.846 | 3.072 |
| glycerol2 | 0.0 | -1.401 |
| lignocerate | 0.0 | -1.494 |
| oleate | 0.0 | -2.752 |
| phosphatidylcholine | 0.0 | -1.162 |
| acetate | 0.0 | -0.377 |
| glucAc | 0.0 | -1.463 |
| Rv0950ko | -2.831 | -0.585 |
| Rv1096ko | 0.856 | -0.148 |
| Rv3684ko | 1.254 | 0.039 |
| delta_otsA_trehalose | -0.34 | -0.281 |