Top 10 genes with highest correlation to Rv0175/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0174/mce1F | (cc=0.8503) | info on Rv0174/mce1F |
| Rv0169/mce1A | (cc=0.8075) | info on Rv0169/mce1A |
| Rv0173/lprK | (cc=0.7597) | info on Rv0173/lprK |
| Rv0171/mce1C | (cc=0.7405) | info on Rv0171/mce1C |
| Rv0176/- | (cc=0.7282) | info on Rv0176/- |
| Rv0172/mce1D | (cc=0.7272) | info on Rv0172/mce1D |
| Rv0178/- | (cc=0.7241) | info on Rv0178/- |
| Rv0168/yrbE1B | (cc=0.7152) | info on Rv0168/yrbE1B |
| Rv0177/- | (cc=0.6971) | info on Rv0177/- |
| Rv0170/mce1B | (cc=0.6905) | info on Rv0170/mce1B |
Correlation of Rv0175/- with Rv0173/lprK
Normalized LFCs for Rv0175/-:
(description and provenance of datasets)
| Rv0175/- | Rv0173/lprK | |
| Fe_supp_jason_reseq | 1.246 | 0.56 |
| low_pH_jason_reseq | 1.593 | 0.276 |
| NO_jason_reseq | 2.646 | 2.326 |
| B6_jason_reseq | 0.925 | 0.3 |
| MHCII_jason_reseq | -1.677 | -1.601 |
| Isoniazid02 | 0.326 | -0.127 |
| Rifampicin4 | 0.977 | 2.044 |
| Ethambutol3 | -0.719 | 1.141 |
| Meropenem3 | 2.1 | 2.5 |
| Vancomycin16 | 1.703 | 2.327 |
| Rv2680_day32 | -1.938 | -0.318 |
| H37Rv_KO_MarP | -0.488 | 0.199 |
| hypoxia_3wks | 1.647 | 2.464 |
| hypoxia_6wks | 1.029 | 1.94 |
| glycerol | 1.685 | 0.282 |
| cholesterol | 1.833 | 1.124 |
| AJ | 0.343 | 0.361 |
| Bibs02 | -2.137 | -3.498 |
| Bibs02c | -2.98 | -2.828 |
| BL6 | -0.298 | 0.437 |
| BL6a | -2.061 | -1.324 |
| BXD01 | -0.142 | 0.896 |
| BXD010 | -0.338 | 0.418 |
| BXD011 | -0.446 | 0.448 |
| BXD03 | 0.273 | 0.851 |
| BXD04 | -0.05 | 0.589 |
| BXD05 | -0.854 | 0.6 |
| BXD06 | -0.602 | 0.227 |
| BXD07 | 0.222 | 1.731 |
| BXD08 | 0.457 | 0.309 |
| BXD09 | -0.624 | 0.997 |
| CAST | -2.077 | -0.771 |
| CCcont | -0.356 | 0.09 |
| DS01 | -1.795 | -3.119 |
| DS02 | -1.245 | -1.528 |
| DS04 | -0.474 | -0.124 |
| DS0c | -1.956 | -1.782 |
| GP01 | -1.594 | -1.4 |
| GP02 | -1.614 | -1.445 |
| GP0c | -2.012 | -0.735 |
| NOD | -2.276 | 0.049 |
| NZO | 0.861 | 0.519 |
| PWK | -2.322 | -1.688 |
| H37Rv_KO_CtpC | 0.139 | 0.028 |
| H37Rv_KO_CtpD | -1.042 | -0.192 |
| H37Rv_KO_Rv1272 | -0.68 | -0.775 |
| H37Rv_KO_SugABC | 1.091 | 1.175 |
| H37Rv_KO_MbtN | 0.806 | 0.079 |
| Trans05 | -0.007 | 1.319 |
| macrophage_unactivated | -1.676 | -0.568 |
| IL1 | -1.694 | -1.747 |
| Rapamycin | -1.507 | -1.433 |
| Tcell | -1.795 | -1.453 |
| GMCSF | -0.51 | 0.512 |
| IFNab | 0.623 | 0.505 |
| IFNg | 0.216 | 0.5 |
| IFNg_GMCSF1 | 0.295 | 0.302 |
| Rv1432_day32 | 0.252 | -0.572 |
| Rv1565c_day32 | -1.376 | -1.966 |
| secA2_input | -1.631 | 0.02 |
| delta_Rv3594 | 0.508 | -0.497 |
| delta_Rv3717 | 0.279 | 0.536 |
| delta_Rv3811 | 0.735 | -0.424 |
| delta_Rv0954 | 0.301 | -0.31 |
| PonA1 | 1.659 | -0.031 |
| EccD1_KO | -0.286 | -0.875 |
| EspI_KO | -0.114 | -0.473 |
| PE35_KO | -0.744 | -0.318 |
| PPE68_KO | 0.083 | -0.432 |
| glycerol2 | -0.464 | -1.03 |
| lignocerate | -2.39 | -3.766 |
| oleate | 0.308 | 0.173 |
| phosphatidylcholine | -1.038 | -1.595 |
| acetate | 0.547 | -0.71 |
| glucAc | 0.268 | -0.556 |
| Rv0950ko | 0.383 | 0.516 |
| Rv1096ko | 0.024 | 0.591 |
| Rv3684ko | 1.48 | 1.179 |
| delta_otsA_trehalose | 0.502 | 1.387 |