Top 10 genes with highest correlation to Rv0175/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0174/mce1F | (cc=0.8503) | info on Rv0174/mce1F |
| Rv0169/mce1A | (cc=0.8075) | info on Rv0169/mce1A |
| Rv0173/lprK | (cc=0.7597) | info on Rv0173/lprK |
| Rv0171/mce1C | (cc=0.7405) | info on Rv0171/mce1C |
| Rv0176/- | (cc=0.7282) | info on Rv0176/- |
| Rv0172/mce1D | (cc=0.7272) | info on Rv0172/mce1D |
| Rv0178/- | (cc=0.7241) | info on Rv0178/- |
| Rv0168/yrbE1B | (cc=0.7152) | info on Rv0168/yrbE1B |
| Rv0177/- | (cc=0.6971) | info on Rv0177/- |
| Rv0170/mce1B | (cc=0.6905) | info on Rv0170/mce1B |
Correlation of Rv0175/- with Rv0168/yrbE1B
Normalized LFCs for Rv0175/-:
(description and provenance of datasets)
| Rv0175/- | Rv0168/yrbE1B | |
| Fe_supp_jason_reseq | 1.246 | 0.398 |
| low_pH_jason_reseq | 1.593 | 0.564 |
| NO_jason_reseq | 2.646 | 1.838 |
| B6_jason_reseq | 0.925 | 1.484 |
| MHCII_jason_reseq | -1.677 | -0.754 |
| Isoniazid02 | 0.326 | -0.834 |
| Rifampicin4 | 0.977 | 1.392 |
| Ethambutol3 | -0.719 | -0.75 |
| Meropenem3 | 2.1 | 1.799 |
| Vancomycin16 | 1.703 | 1.409 |
| Rv2680_day32 | -1.938 | 1.372 |
| H37Rv_KO_MarP | -0.488 | 0.573 |
| hypoxia_3wks | 1.647 | 1.774 |
| hypoxia_6wks | 1.029 | 1.159 |
| glycerol | 1.685 | 0.233 |
| cholesterol | 1.833 | 3.311 |
| AJ | 0.343 | 0.316 |
| Bibs02 | -2.137 | -2.281 |
| Bibs02c | -2.98 | -3.139 |
| BL6 | -0.298 | -0.045 |
| BL6a | -2.061 | -1.406 |
| BXD01 | -0.142 | -0.088 |
| BXD010 | -0.338 | -0.098 |
| BXD011 | -0.446 | -0.004 |
| BXD03 | 0.273 | 0.356 |
| BXD04 | -0.05 | 0.64 |
| BXD05 | -0.854 | -0.537 |
| BXD06 | -0.602 | -0.416 |
| BXD07 | 0.222 | -0.119 |
| BXD08 | 0.457 | -0.19 |
| BXD09 | -0.624 | 0.405 |
| CAST | -2.077 | -0.662 |
| CCcont | -0.356 | -0.564 |
| DS01 | -1.795 | -2.563 |
| DS02 | -1.245 | -1.432 |
| DS04 | -0.474 | -0.27 |
| DS0c | -1.956 | -1.925 |
| GP01 | -1.594 | -2.017 |
| GP02 | -1.614 | -1.527 |
| GP0c | -2.012 | -0.993 |
| NOD | -2.276 | 0.905 |
| NZO | 0.861 | 0.958 |
| PWK | -2.322 | -1.498 |
| H37Rv_KO_CtpC | 0.139 | -1.22 |
| H37Rv_KO_CtpD | -1.042 | -0.168 |
| H37Rv_KO_Rv1272 | -0.68 | -0.83 |
| H37Rv_KO_SugABC | 1.091 | 0.893 |
| H37Rv_KO_MbtN | 0.806 | -1.316 |
| Trans05 | -0.007 | -0.345 |
| macrophage_unactivated | -1.676 | 0.022 |
| IL1 | -1.694 | -1.786 |
| Rapamycin | -1.507 | -1.636 |
| Tcell | -1.795 | -2.027 |
| GMCSF | -0.51 | -0.071 |
| IFNab | 0.623 | 0.475 |
| IFNg | 0.216 | 0.371 |
| IFNg_GMCSF1 | 0.295 | -0.17 |
| Rv1432_day32 | 0.252 | 1.561 |
| Rv1565c_day32 | -1.376 | -2.834 |
| secA2_input | -1.631 | -0.787 |
| delta_Rv3594 | 0.508 | -0.352 |
| delta_Rv3717 | 0.279 | 0.196 |
| delta_Rv3811 | 0.735 | -0.839 |
| delta_Rv0954 | 0.301 | 0.973 |
| PonA1 | 1.659 | 0.388 |
| EccD1_KO | -0.286 | 0.96 |
| EspI_KO | -0.114 | 0.436 |
| PE35_KO | -0.744 | -0.575 |
| PPE68_KO | 0.083 | -0.41 |
| glycerol2 | -0.464 | -1.575 |
| lignocerate | -2.39 | -3.529 |
| oleate | 0.308 | -0.639 |
| phosphatidylcholine | -1.038 | -2.092 |
| acetate | 0.547 | 0.209 |
| glucAc | 0.268 | -0.52 |
| Rv0950ko | 0.383 | -0.115 |
| Rv1096ko | 0.024 | -0.151 |
| Rv3684ko | 1.48 | 0.799 |
| delta_otsA_trehalose | 0.502 | -0.4 |