Top 10 genes with highest correlation to Rv0170/mce1B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0172/mce1D | (cc=0.843) | info on Rv0172/mce1D |
| Rv0169/mce1A | (cc=0.8405) | info on Rv0169/mce1A |
| Rv0174/mce1F | (cc=0.8249) | info on Rv0174/mce1F |
| Rv0173/lprK | (cc=0.8111) | info on Rv0173/lprK |
| Rv0171/mce1C | (cc=0.7544) | info on Rv0171/mce1C |
| Rv0178/- | (cc=0.7313) | info on Rv0178/- |
| Rv0168/yrbE1B | (cc=0.7037) | info on Rv0168/yrbE1B |
| Rv0167/yrbE1A | (cc=0.7006) | info on Rv0167/yrbE1A |
| Rv0176/- | (cc=0.6938) | info on Rv0176/- |
| Rv0175/- | (cc=0.6905) | info on Rv0175/- |
Correlation of Rv0170/mce1B with Rv0178/-
Normalized LFCs for Rv0170/mce1B:
(description and provenance of datasets)
| Rv0170/mce1B | Rv0178/- | |
| Fe_supp_jason_reseq | 0.458 | -0.677 |
| low_pH_jason_reseq | 0.862 | 0.813 |
| NO_jason_reseq | 2.426 | 2.662 |
| B6_jason_reseq | 0.122 | 0.114 |
| MHCII_jason_reseq | -2.28 | -1.968 |
| Isoniazid02 | -0.861 | -1.262 |
| Rifampicin4 | 1.562 | 1.527 |
| Ethambutol3 | 0.072 | -1.294 |
| Meropenem3 | 1.781 | 2.044 |
| Vancomycin16 | 1.714 | 1.22 |
| Rv2680_day32 | 0.268 | -1.573 |
| H37Rv_KO_MarP | 0.418 | 1.082 |
| hypoxia_3wks | 2.177 | 2.133 |
| hypoxia_6wks | 1.919 | 1.764 |
| glycerol | -1.172 | -0.958 |
| cholesterol | 0.647 | 0.27 |
| AJ | 0.013 | -0.274 |
| Bibs02 | -2.482 | -1.784 |
| Bibs02c | -0.564 | -2.402 |
| BL6 | -0.356 | -0.781 |
| BL6a | 0.023 | -2.395 |
| BXD01 | 1.134 | 0.246 |
| BXD010 | 0.841 | -0.962 |
| BXD011 | 0.853 | -0.467 |
| BXD03 | 0.691 | -0.828 |
| BXD04 | 0.777 | -0.261 |
| BXD05 | 0.947 | -0.695 |
| BXD06 | 0.129 | -1.155 |
| BXD07 | 1.051 | -0.337 |
| BXD08 | 0.89 | -1.298 |
| BXD09 | 1.169 | -0.245 |
| CAST | -1.243 | -1.093 |
| CCcont | -0.11 | -0.492 |
| DS01 | -3.107 | -1.649 |
| DS02 | -2.264 | -0.64 |
| DS04 | -2.115 | -0.675 |
| DS0c | -2.402 | -2.366 |
| GP01 | -1.666 | -1.049 |
| GP02 | -0.802 | -0.281 |
| GP0c | -0.521 | -0.074 |
| NOD | -1.303 | -0.963 |
| NZO | 1.91 | 0.984 |
| PWK | -1.566 | -1.408 |
| H37Rv_KO_CtpC | 0.165 | -1.417 |
| H37Rv_KO_CtpD | 0.136 | 0.013 |
| H37Rv_KO_Rv1272 | 0.375 | -0.257 |
| H37Rv_KO_SugABC | -0.145 | 1.406 |
| H37Rv_KO_MbtN | 0.382 | 0.027 |
| Trans05 | 0.629 | -0.696 |
| macrophage_unactivated | -0.559 | -0.41 |
| IL1 | -2.447 | -1.875 |
| Rapamycin | -2.124 | -2.489 |
| Tcell | -1.362 | -0.766 |
| GMCSF | -0.354 | -1.933 |
| IFNab | 0.088 | -0.71 |
| IFNg | -0.473 | -0.168 |
| IFNg_GMCSF1 | -1.232 | 0.047 |
| Rv1432_day32 | 0.387 | 0.632 |
| Rv1565c_day32 | -1.464 | -2.785 |
| secA2_input | -0.65 | -0.869 |
| delta_Rv3594 | 0.661 | 0.382 |
| delta_Rv3717 | -0.101 | 1.065 |
| delta_Rv3811 | 0.703 | 0.309 |
| delta_Rv0954 | 0.014 | 0.963 |
| PonA1 | 0.919 | 0.542 |
| EccD1_KO | 0.118 | 0.464 |
| EspI_KO | 0.337 | 0.04 |
| PE35_KO | 0.204 | 0.239 |
| PPE68_KO | 0.378 | 0.285 |
| glycerol2 | -0.881 | -1.352 |
| lignocerate | -3.396 | -3.514 |
| oleate | 0.472 | 0.648 |
| phosphatidylcholine | -1.409 | -1.538 |
| acetate | -0.893 | -0.953 |
| glucAc | -1.132 | -1.257 |
| Rv0950ko | 0.796 | -0.338 |
| Rv1096ko | 0.666 | -0.434 |
| Rv3684ko | 1.831 | 0.783 |
| delta_otsA_trehalose | -0.564 | -0.297 |