Top 10 genes with highest correlation to Rv0170/mce1B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0172/mce1D | (cc=0.843) | info on Rv0172/mce1D |
| Rv0169/mce1A | (cc=0.8405) | info on Rv0169/mce1A |
| Rv0174/mce1F | (cc=0.8249) | info on Rv0174/mce1F |
| Rv0173/lprK | (cc=0.8111) | info on Rv0173/lprK |
| Rv0171/mce1C | (cc=0.7544) | info on Rv0171/mce1C |
| Rv0178/- | (cc=0.7313) | info on Rv0178/- |
| Rv0168/yrbE1B | (cc=0.7037) | info on Rv0168/yrbE1B |
| Rv0167/yrbE1A | (cc=0.7006) | info on Rv0167/yrbE1A |
| Rv0176/- | (cc=0.6938) | info on Rv0176/- |
| Rv0175/- | (cc=0.6905) | info on Rv0175/- |
Correlation of Rv0170/mce1B with Rv0172/mce1D
Normalized LFCs for Rv0170/mce1B:
(description and provenance of datasets)
| Rv0170/mce1B | Rv0172/mce1D | |
| Fe_supp_jason_reseq | 0.458 | 0.494 |
| low_pH_jason_reseq | 0.862 | 0.942 |
| NO_jason_reseq | 2.426 | 2.326 |
| B6_jason_reseq | 0.122 | 0.236 |
| MHCII_jason_reseq | -2.28 | -0.915 |
| Isoniazid02 | -0.861 | -1.544 |
| Rifampicin4 | 1.562 | 1.638 |
| Ethambutol3 | 0.072 | 0.285 |
| Meropenem3 | 1.781 | 1.174 |
| Vancomycin16 | 1.714 | 1.125 |
| Rv2680_day32 | 0.268 | 0.036 |
| H37Rv_KO_MarP | 0.418 | 0.494 |
| hypoxia_3wks | 2.177 | 1.786 |
| hypoxia_6wks | 1.919 | 1.625 |
| glycerol | -1.172 | -0.856 |
| cholesterol | 0.647 | 0.313 |
| AJ | 0.013 | -0.134 |
| Bibs02 | -2.482 | -2.327 |
| Bibs02c | -0.564 | -2.543 |
| BL6 | -0.356 | 0.729 |
| BL6a | 0.023 | -0.946 |
| BXD01 | 1.134 | 0.643 |
| BXD010 | 0.841 | 0.201 |
| BXD011 | 0.853 | 0.468 |
| BXD03 | 0.691 | 0.722 |
| BXD04 | 0.777 | 0.686 |
| BXD05 | 0.947 | 0.515 |
| BXD06 | 0.129 | -0.318 |
| BXD07 | 1.051 | 0.764 |
| BXD08 | 0.89 | 0.006 |
| BXD09 | 1.169 | 0.98 |
| CAST | -1.243 | -1.18 |
| CCcont | -0.11 | 0.201 |
| DS01 | -3.107 | -3.042 |
| DS02 | -2.264 | -2.614 |
| DS04 | -2.115 | -0.652 |
| DS0c | -2.402 | -2.49 |
| GP01 | -1.666 | -1.38 |
| GP02 | -0.802 | -1.297 |
| GP0c | -0.521 | -0.704 |
| NOD | -1.303 | -0.314 |
| NZO | 1.91 | 0.996 |
| PWK | -1.566 | -1.404 |
| H37Rv_KO_CtpC | 0.165 | -0.765 |
| H37Rv_KO_CtpD | 0.136 | -0.05 |
| H37Rv_KO_Rv1272 | 0.375 | -0.018 |
| H37Rv_KO_SugABC | -0.145 | 0.329 |
| H37Rv_KO_MbtN | 0.382 | -0.281 |
| Trans05 | 0.629 | 0.011 |
| macrophage_unactivated | -0.559 | -0.193 |
| IL1 | -2.447 | -1.714 |
| Rapamycin | -2.124 | -1.596 |
| Tcell | -1.362 | -1.603 |
| GMCSF | -0.354 | 0.187 |
| IFNab | 0.088 | 0.366 |
| IFNg | -0.473 | 0.323 |
| IFNg_GMCSF1 | -1.232 | -0.324 |
| Rv1432_day32 | 0.387 | 0.162 |
| Rv1565c_day32 | -1.464 | -1.813 |
| secA2_input | -0.65 | -0.18 |
| delta_Rv3594 | 0.661 | 0.177 |
| delta_Rv3717 | -0.101 | 0.364 |
| delta_Rv3811 | 0.703 | -0.245 |
| delta_Rv0954 | 0.014 | 0.191 |
| PonA1 | 0.919 | 0.201 |
| EccD1_KO | 0.118 | 0.155 |
| EspI_KO | 0.337 | -0.302 |
| PE35_KO | 0.204 | -0.018 |
| PPE68_KO | 0.378 | 0.0 |
| glycerol2 | -0.881 | 0.121 |
| lignocerate | -3.396 | -2.221 |
| oleate | 0.472 | 0.855 |
| phosphatidylcholine | -1.409 | -0.546 |
| acetate | -0.893 | 0.904 |
| glucAc | -1.132 | 0.288 |
| Rv0950ko | 0.796 | 0.112 |
| Rv1096ko | 0.666 | -0.57 |
| Rv3684ko | 1.831 | 0.747 |
| delta_otsA_trehalose | -0.564 | -0.065 |