Top 10 genes with highest correlation to Rv0169/mce1A:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0172/mce1D | (cc=0.9328) | info on Rv0172/mce1D |
| Rv0174/mce1F | (cc=0.9275) | info on Rv0174/mce1F |
| Rv0173/lprK | (cc=0.9112) | info on Rv0173/lprK |
| Rv0171/mce1C | (cc=0.8938) | info on Rv0171/mce1C |
| Rv0170/mce1B | (cc=0.8405) | info on Rv0170/mce1B |
| Rv0168/yrbE1B | (cc=0.8245) | info on Rv0168/yrbE1B |
| Rv0167/yrbE1A | (cc=0.8148) | info on Rv0167/yrbE1A |
| Rv0175/- | (cc=0.8075) | info on Rv0175/- |
| Rv0176/- | (cc=0.7901) | info on Rv0176/- |
| Rv0178/- | (cc=0.7654) | info on Rv0178/- |
Correlation of Rv0169/mce1A with Rv0176/-
Normalized LFCs for Rv0169/mce1A:
(description and provenance of datasets)
| Rv0169/mce1A | Rv0176/- | |
| Fe_supp_jason_reseq | 0.674 | -0.81 |
| low_pH_jason_reseq | 0.581 | 1.268 |
| NO_jason_reseq | 2.46 | 2.659 |
| B6_jason_reseq | 0.209 | 0.249 |
| MHCII_jason_reseq | -0.879 | -1.942 |
| Isoniazid02 | -0.501 | 0.237 |
| Rifampicin4 | 1.451 | 1.803 |
| Ethambutol3 | 0.444 | 1.617 |
| Meropenem3 | 2.361 | 2.131 |
| Vancomycin16 | 1.825 | 1.963 |
| Rv2680_day32 | 0.351 | 0.076 |
| H37Rv_KO_MarP | 0.457 | 0.896 |
| hypoxia_3wks | 2.173 | 1.878 |
| hypoxia_6wks | 2.222 | 2.24 |
| glycerol | 0.388 | 1.777 |
| cholesterol | 1.052 | 5.769 |
| AJ | -0.168 | 0.476 |
| Bibs02 | -2.951 | -3.257 |
| Bibs02c | -2.284 | -1.758 |
| BL6 | 0.631 | -0.548 |
| BL6a | -1.444 | -0.72 |
| BXD01 | 0.805 | 1.566 |
| BXD010 | 0.846 | 0.482 |
| BXD011 | 0.412 | 1.161 |
| BXD03 | 0.827 | 1.029 |
| BXD04 | 0.592 | 0.753 |
| BXD05 | 0.512 | 1.464 |
| BXD06 | 0.075 | 0.728 |
| BXD07 | 0.797 | 1.32 |
| BXD08 | 0.301 | 1.071 |
| BXD09 | 0.734 | 1.447 |
| CAST | -0.766 | -1.251 |
| CCcont | -0.006 | 0.185 |
| DS01 | -2.392 | -1.403 |
| DS02 | -1.793 | -0.181 |
| DS04 | -0.783 | -0.496 |
| DS0c | -2.292 | -2.382 |
| GP01 | -1.538 | -1.24 |
| GP02 | -1.501 | -0.236 |
| GP0c | -0.702 | -0.068 |
| NOD | -0.163 | -0.864 |
| NZO | 1.186 | 1.371 |
| PWK | -1.319 | -1.378 |
| H37Rv_KO_CtpC | -0.468 | -0.824 |
| H37Rv_KO_CtpD | -0.573 | 0.972 |
| H37Rv_KO_Rv1272 | 0.587 | -0.441 |
| H37Rv_KO_SugABC | 1.394 | 0.956 |
| H37Rv_KO_MbtN | 0.256 | 1.027 |
| Trans05 | 0.501 | -0.173 |
| macrophage_unactivated | -0.625 | -0.821 |
| IL1 | -1.48 | -1.195 |
| Rapamycin | -1.97 | -2.102 |
| Tcell | -1.659 | -1.127 |
| GMCSF | 0.153 | -0.523 |
| IFNab | 0.133 | -0.109 |
| IFNg | 0.118 | 0.567 |
| IFNg_GMCSF1 | 0.16 | -0.434 |
| Rv1432_day32 | 0.408 | -0.3 |
| Rv1565c_day32 | -1.906 | -1.995 |
| secA2_input | -0.794 | -3.073 |
| delta_Rv3594 | 0.233 | 1.031 |
| delta_Rv3717 | 0.568 | 1.739 |
| delta_Rv3811 | -0.098 | 0.807 |
| delta_Rv0954 | 0.382 | 1.454 |
| PonA1 | 0.272 | 0.615 |
| EccD1_KO | -0.579 | -0.444 |
| EspI_KO | -0.613 | -0.168 |
| PE35_KO | -0.213 | -0.28 |
| PPE68_KO | 0.179 | -0.022 |
| glycerol2 | -0.254 | -0.123 |
| lignocerate | -2.656 | -2.384 |
| oleate | 0.759 | 1.004 |
| phosphatidylcholine | -0.725 | -0.77 |
| acetate | 0.658 | 1.162 |
| glucAc | 0.451 | 0.318 |
| Rv0950ko | 0.513 | -0.286 |
| Rv1096ko | -0.018 | -1.318 |
| Rv3684ko | 0.537 | 0.314 |
| delta_otsA_trehalose | 0.014 | 0.337 |