Top 10 genes with highest correlation to Rv0158/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1901/cinA | (cc=0.5729) | info on Rv1901/cinA |
| Rv1691/- | (cc=0.5079) | info on Rv1691/- |
| Rv3720/- | (cc=0.4715) | info on Rv3720/- |
| Rv2683/- | (cc=0.4672) | info on Rv2683/- |
| Rv3719/- | (cc=0.4661) | info on Rv3719/- |
| Rv0047c/- | (cc=0.4659) | info on Rv0047c/- |
| Rv0362/mgtE | (cc=0.4569) | info on Rv0362/mgtE |
| Rv2427c/proA | (cc=0.4546) | info on Rv2427c/proA |
| Rv2092c/helY | (cc=0.4461) | info on Rv2092c/helY |
| Rv1593c/- | (cc=0.4346) | info on Rv1593c/- |
Correlation of Rv0158/- with Rv3720/-
Normalized LFCs for Rv0158/-:
(description and provenance of datasets)
| Rv0158/- | Rv3720/- | |
| Fe_supp_jason_reseq | 1.285 | -0.497 |
| low_pH_jason_reseq | 1.522 | -0.054 |
| NO_jason_reseq | 3.993 | 0.916 |
| B6_jason_reseq | 2.481 | -1.154 |
| MHCII_jason_reseq | 0.251 | -1.901 |
| Isoniazid02 | -4.175 | -2.088 |
| Rifampicin4 | -0.168 | -2.578 |
| Ethambutol3 | -0.134 | -0.383 |
| Meropenem3 | -0.244 | -3.225 |
| Vancomycin16 | 0.355 | -1.86 |
| Rv2680_day32 | -1.386 | 0.081 |
| H37Rv_KO_MarP | -0.19 | -3.041 |
| hypoxia_3wks | -2.743 | -6.0 |
| hypoxia_6wks | -1.574 | -4.679 |
| glycerol | -1.994 | -2.794 |
| cholesterol | -0.587 | -0.648 |
| AJ | -1.716 | -1.988 |
| Bibs02 | -0.674 | -1.238 |
| Bibs02c | -2.451 | -1.0 |
| BL6 | 0.445 | 0.626 |
| BL6a | -1.138 | 0.606 |
| BXD01 | 0.569 | 0.506 |
| BXD010 | 0.266 | 0.708 |
| BXD011 | 0.659 | 1.247 |
| BXD03 | -0.333 | 0.603 |
| BXD04 | 0.764 | 0.847 |
| BXD05 | -0.102 | 1.122 |
| BXD06 | -0.372 | 1.077 |
| BXD07 | 0.437 | 0.949 |
| BXD08 | 0.798 | 0.338 |
| BXD09 | 0.039 | 0.498 |
| CAST | -0.083 | -0.542 |
| CCcont | -0.162 | 1.363 |
| DS01 | -2.659 | -1.557 |
| DS02 | -0.747 | 0.161 |
| DS04 | -1.505 | 0.779 |
| DS0c | -2.184 | -1.956 |
| GP01 | -0.124 | -0.372 |
| GP02 | -0.292 | -0.423 |
| GP0c | -0.575 | 0.073 |
| NOD | -0.656 | -1.287 |
| NZO | -0.429 | -0.893 |
| PWK | -0.433 | 0.198 |
| H37Rv_KO_CtpC | 2.983 | 1.319 |
| H37Rv_KO_CtpD | 0.195 | -0.062 |
| H37Rv_KO_Rv1272 | -0.54 | 0.723 |
| H37Rv_KO_SugABC | 0.082 | 0.222 |
| H37Rv_KO_MbtN | 0.376 | 1.704 |
| Trans05 | -0.099 | 0.498 |
| macrophage_unactivated | -2.26 | -0.107 |
| IL1 | 0.371 | -0.205 |
| Rapamycin | 0.104 | 0.236 |
| Tcell | 0.736 | 1.681 |
| GMCSF | -1.061 | -0.182 |
| IFNab | -0.916 | -0.07 |
| IFNg | -0.649 | -2.673 |
| IFNg_GMCSF1 | -1.159 | -1.304 |
| Rv1432_day32 | -0.261 | -2.155 |
| Rv1565c_day32 | -1.594 | -2.267 |
| secA2_input | 0.592 | 1.495 |
| delta_Rv3594 | -1.765 | -0.375 |
| delta_Rv3717 | -1.047 | 0.258 |
| delta_Rv3811 | -1.657 | -0.336 |
| delta_Rv0954 | -0.965 | -0.236 |
| PonA1 | -0.639 | -0.561 |
| EccD1_KO | -0.411 | -1.105 |
| EspI_KO | -0.576 | -0.89 |
| PE35_KO | -0.671 | -0.152 |
| PPE68_KO | -0.582 | -0.451 |
| glycerol2 | 0.125 | -0.338 |
| lignocerate | -0.766 | -0.462 |
| oleate | 0.593 | -0.537 |
| phosphatidylcholine | -0.388 | -0.531 |
| acetate | -0.362 | -0.401 |
| glucAc | -0.211 | -0.119 |
| Rv0950ko | 1.254 | 0.528 |
| Rv1096ko | 0.235 | 0.127 |
| Rv3684ko | 1.238 | 0.403 |
| delta_otsA_trehalose | -0.081 | 0.536 |