Top 10 genes with highest correlation to Rv0158/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1901/cinA | (cc=0.5729) | info on Rv1901/cinA |
| Rv1691/- | (cc=0.5079) | info on Rv1691/- |
| Rv3720/- | (cc=0.4715) | info on Rv3720/- |
| Rv2683/- | (cc=0.4672) | info on Rv2683/- |
| Rv3719/- | (cc=0.4661) | info on Rv3719/- |
| Rv0047c/- | (cc=0.4659) | info on Rv0047c/- |
| Rv0362/mgtE | (cc=0.4569) | info on Rv0362/mgtE |
| Rv2427c/proA | (cc=0.4546) | info on Rv2427c/proA |
| Rv2092c/helY | (cc=0.4461) | info on Rv2092c/helY |
| Rv1593c/- | (cc=0.4346) | info on Rv1593c/- |
Correlation of Rv0158/- with Rv2683/-
Normalized LFCs for Rv0158/-:
(description and provenance of datasets)
| Rv0158/- | Rv2683/- | |
| Fe_supp_jason_reseq | 1.285 | 0.644 |
| low_pH_jason_reseq | 1.522 | 1.859 |
| NO_jason_reseq | 3.993 | 0.184 |
| B6_jason_reseq | 2.481 | 1.008 |
| MHCII_jason_reseq | 0.251 | -0.926 |
| Isoniazid02 | -4.175 | 0.076 |
| Rifampicin4 | -0.168 | -0.092 |
| Ethambutol3 | -0.134 | 0.063 |
| Meropenem3 | -0.244 | 1.222 |
| Vancomycin16 | 0.355 | 0.255 |
| Rv2680_day32 | -1.386 | 0.618 |
| H37Rv_KO_MarP | -0.19 | -0.49 |
| hypoxia_3wks | -2.743 | -1.655 |
| hypoxia_6wks | -1.574 | -0.733 |
| glycerol | -1.994 | -0.688 |
| cholesterol | -0.587 | -0.305 |
| AJ | -1.716 | -1.309 |
| Bibs02 | -0.674 | -0.6 |
| Bibs02c | -2.451 | -0.74 |
| BL6 | 0.445 | 0.381 |
| BL6a | -1.138 | 0.55 |
| BXD01 | 0.569 | 1.41 |
| BXD010 | 0.266 | 1.21 |
| BXD011 | 0.659 | 1.792 |
| BXD03 | -0.333 | 1.022 |
| BXD04 | 0.764 | 1.699 |
| BXD05 | -0.102 | 1.385 |
| BXD06 | -0.372 | 1.319 |
| BXD07 | 0.437 | 1.064 |
| BXD08 | 0.798 | 1.166 |
| BXD09 | 0.039 | 1.447 |
| CAST | -0.083 | -0.265 |
| CCcont | -0.162 | 0.582 |
| DS01 | -2.659 | -1.088 |
| DS02 | -0.747 | -0.206 |
| DS04 | -1.505 | -0.409 |
| DS0c | -2.184 | -2.23 |
| GP01 | -0.124 | -1.143 |
| GP02 | -0.292 | -0.243 |
| GP0c | -0.575 | -1.159 |
| NOD | -0.656 | -0.236 |
| NZO | -0.429 | 0.675 |
| PWK | -0.433 | -0.877 |
| H37Rv_KO_CtpC | 2.983 | 0.298 |
| H37Rv_KO_CtpD | 0.195 | 0.834 |
| H37Rv_KO_Rv1272 | -0.54 | 0.362 |
| H37Rv_KO_SugABC | 0.082 | 0.458 |
| H37Rv_KO_MbtN | 0.376 | -0.775 |
| Trans05 | -0.099 | 0.416 |
| macrophage_unactivated | -2.26 | -0.423 |
| IL1 | 0.371 | -0.964 |
| Rapamycin | 0.104 | -0.865 |
| Tcell | 0.736 | 1.02 |
| GMCSF | -1.061 | -1.138 |
| IFNab | -0.916 | -0.562 |
| IFNg | -0.649 | -1.069 |
| IFNg_GMCSF1 | -1.159 | -1.712 |
| Rv1432_day32 | -0.261 | -0.953 |
| Rv1565c_day32 | -1.594 | 0.096 |
| secA2_input | 0.592 | -0.647 |
| delta_Rv3594 | -1.765 | -0.569 |
| delta_Rv3717 | -1.047 | -0.356 |
| delta_Rv3811 | -1.657 | -0.824 |
| delta_Rv0954 | -0.965 | -0.366 |
| PonA1 | -0.639 | -0.806 |
| EccD1_KO | -0.411 | -0.112 |
| EspI_KO | -0.576 | -0.228 |
| PE35_KO | -0.671 | 0.875 |
| PPE68_KO | -0.582 | 0.374 |
| glycerol2 | 0.125 | -0.981 |
| lignocerate | -0.766 | -0.647 |
| oleate | 0.593 | 0.393 |
| phosphatidylcholine | -0.388 | -0.161 |
| acetate | -0.362 | -0.294 |
| glucAc | -0.211 | -1.034 |
| Rv0950ko | 1.254 | -0.223 |
| Rv1096ko | 0.235 | -0.712 |
| Rv3684ko | 1.238 | 1.683 |
| delta_otsA_trehalose | -0.081 | 0.183 |