Top 10 genes with highest correlation to Rv0138/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3784/- | (cc=0.601) | info on Rv3784/- |
| Rv3440c/- | (cc=0.519) | info on Rv3440c/- |
| Rv0454/- | (cc=0.4943) | info on Rv0454/- |
| Rv3585/radA | (cc=0.4742) | info on Rv3585/radA |
| Rv3879c/espK | (cc=0.4715) | info on Rv3879c/espK |
| Rv3018c/PPE46 | (cc=0.4683) | info on Rv3018c/PPE46 |
| Rv1319c/- | (cc=0.4546) | info on Rv1319c/- |
| Rv1249c/- | (cc=0.4538) | info on Rv1249c/- |
| Rv3729/- | (cc=0.4481) | info on Rv3729/- |
| Rv3339c/icd1 | (cc=0.4473) | info on Rv3339c/icd1 |
Correlation of Rv0138/- with Rv1249c/-
Normalized LFCs for Rv0138/-:
(description and provenance of datasets)
| Rv0138/- | Rv1249c/- | |
| Fe_supp_jason_reseq | -0.759 | -0.041 |
| low_pH_jason_reseq | -0.778 | -1.241 |
| NO_jason_reseq | -0.131 | -0.809 |
| B6_jason_reseq | -0.133 | 0.178 |
| MHCII_jason_reseq | -0.222 | -0.072 |
| Isoniazid02 | 1.099 | 0.703 |
| Rifampicin4 | -0.398 | 0.579 |
| Ethambutol3 | 2.393 | 1.188 |
| Meropenem3 | 0.652 | 0.412 |
| Vancomycin16 | -0.096 | 0.276 |
| Rv2680_day32 | 1.396 | 0.482 |
| H37Rv_KO_MarP | 0.306 | 0.492 |
| hypoxia_3wks | 0.187 | 0.411 |
| hypoxia_6wks | 0.236 | 0.447 |
| glycerol | 0.767 | 0.402 |
| cholesterol | 0.272 | 0.382 |
| AJ | 0.635 | 0.224 |
| Bibs02 | 0.045 | -0.351 |
| Bibs02c | 0.499 | -0.493 |
| BL6 | -0.08 | -0.042 |
| BL6a | 0.346 | -0.445 |
| BXD01 | 0.259 | -0.466 |
| BXD010 | -0.77 | -0.05 |
| BXD011 | 0.054 | -0.828 |
| BXD03 | 0.329 | -0.385 |
| BXD04 | -0.094 | -0.637 |
| BXD05 | 0.052 | -0.156 |
| BXD06 | -0.024 | -0.266 |
| BXD07 | 0.196 | -0.373 |
| BXD08 | -0.231 | -0.374 |
| BXD09 | -0.547 | -0.39 |
| CAST | 0.627 | 0.349 |
| CCcont | 0.037 | -0.314 |
| DS01 | -0.139 | 0.216 |
| DS02 | -0.274 | 0.05 |
| DS04 | 0.364 | 0.294 |
| DS0c | 0.009 | 0.607 |
| GP01 | -0.302 | -0.243 |
| GP02 | 0.915 | 0.941 |
| GP0c | 0.219 | -0.651 |
| NOD | -0.116 | 0.098 |
| NZO | 0.386 | -0.477 |
| PWK | 0.22 | -0.084 |
| H37Rv_KO_CtpC | 0.305 | 0.48 |
| H37Rv_KO_CtpD | 1.534 | -0.271 |
| H37Rv_KO_Rv1272 | 0.13 | -0.221 |
| H37Rv_KO_SugABC | 0.987 | -0.482 |
| H37Rv_KO_MbtN | 0.582 | -0.62 |
| Trans05 | 0.136 | 0.144 |
| macrophage_unactivated | 0.846 | 0.395 |
| IL1 | -0.442 | 0.0 |
| Rapamycin | 0.322 | -0.743 |
| Tcell | -0.44 | 0.241 |
| GMCSF | -0.143 | -0.116 |
| IFNab | -0.759 | -0.166 |
| IFNg | 0.043 | 0.615 |
| IFNg_GMCSF1 | 0.459 | 0.531 |
| Rv1432_day32 | 0.67 | 0.529 |
| Rv1565c_day32 | -0.924 | 0.403 |
| secA2_input | -0.348 | -0.814 |
| delta_Rv3594 | -0.791 | -0.783 |
| delta_Rv3717 | -0.395 | -1.08 |
| delta_Rv3811 | -0.714 | -0.986 |
| delta_Rv0954 | -1.23 | -0.857 |
| PonA1 | -0.491 | -0.629 |
| EccD1_KO | 0.089 | -0.497 |
| EspI_KO | -0.391 | 0.177 |
| PE35_KO | 0.07 | -0.368 |
| PPE68_KO | -0.243 | 0.25 |
| glycerol2 | 0.647 | -0.123 |
| lignocerate | 0.549 | 1.066 |
| oleate | 0.275 | 0.647 |
| phosphatidylcholine | 0.37 | 1.207 |
| acetate | 0.291 | 0.234 |
| glucAc | 0.318 | 0.151 |
| Rv0950ko | -0.039 | -0.283 |
| Rv1096ko | -0.196 | -0.449 |
| Rv3684ko | 0.17 | -0.167 |
| delta_otsA_trehalose | -0.057 | -0.094 |