Top 10 genes with highest correlation to Rv0138/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3784/- | (cc=0.601) | info on Rv3784/- |
| Rv3440c/- | (cc=0.519) | info on Rv3440c/- |
| Rv0454/- | (cc=0.4943) | info on Rv0454/- |
| Rv3585/radA | (cc=0.4742) | info on Rv3585/radA |
| Rv3879c/espK | (cc=0.4715) | info on Rv3879c/espK |
| Rv3018c/PPE46 | (cc=0.4683) | info on Rv3018c/PPE46 |
| Rv1319c/- | (cc=0.4546) | info on Rv1319c/- |
| Rv1249c/- | (cc=0.4538) | info on Rv1249c/- |
| Rv3729/- | (cc=0.4481) | info on Rv3729/- |
| Rv3339c/icd1 | (cc=0.4473) | info on Rv3339c/icd1 |
Correlation of Rv0138/- with Rv0454/-
Normalized LFCs for Rv0138/-:
(description and provenance of datasets)
| Rv0138/- | Rv0454/- | |
| Fe_supp_jason_reseq | -0.759 | -0.603 |
| low_pH_jason_reseq | -0.778 | -1.353 |
| NO_jason_reseq | -0.131 | -0.701 |
| B6_jason_reseq | -0.133 | -0.519 |
| MHCII_jason_reseq | -0.222 | -0.323 |
| Isoniazid02 | 1.099 | 2.137 |
| Rifampicin4 | -0.398 | 0.29 |
| Ethambutol3 | 2.393 | 4.387 |
| Meropenem3 | 0.652 | 0.593 |
| Vancomycin16 | -0.096 | 0.241 |
| Rv2680_day32 | 1.396 | 0.579 |
| H37Rv_KO_MarP | 0.306 | -0.357 |
| hypoxia_3wks | 0.187 | 0.407 |
| hypoxia_6wks | 0.236 | 0.787 |
| glycerol | 0.767 | 0.483 |
| cholesterol | 0.272 | -1.043 |
| AJ | 0.635 | 0.351 |
| Bibs02 | 0.045 | 0.217 |
| Bibs02c | 0.499 | -0.767 |
| BL6 | -0.08 | -0.395 |
| BL6a | 0.346 | -0.458 |
| BXD01 | 0.259 | 0.155 |
| BXD010 | -0.77 | -0.053 |
| BXD011 | 0.054 | -0.006 |
| BXD03 | 0.329 | -0.163 |
| BXD04 | -0.094 | 0.049 |
| BXD05 | 0.052 | 0.47 |
| BXD06 | -0.024 | 0.069 |
| BXD07 | 0.196 | 0.017 |
| BXD08 | -0.231 | 0.079 |
| BXD09 | -0.547 | -0.202 |
| CAST | 0.627 | -0.364 |
| CCcont | 0.037 | -0.12 |
| DS01 | -0.139 | -0.339 |
| DS02 | -0.274 | 0.154 |
| DS04 | 0.364 | 0.661 |
| DS0c | 0.009 | 0.121 |
| GP01 | -0.302 | 0.632 |
| GP02 | 0.915 | -0.254 |
| GP0c | 0.219 | -0.778 |
| NOD | -0.116 | 0.159 |
| NZO | 0.386 | 0.126 |
| PWK | 0.22 | 0.358 |
| H37Rv_KO_CtpC | 0.305 | 0.866 |
| H37Rv_KO_CtpD | 1.534 | 0.065 |
| H37Rv_KO_Rv1272 | 0.13 | 1.187 |
| H37Rv_KO_SugABC | 0.987 | 1.824 |
| H37Rv_KO_MbtN | 0.582 | -0.202 |
| Trans05 | 0.136 | 1.495 |
| macrophage_unactivated | 0.846 | -1.382 |
| IL1 | -0.442 | -1.053 |
| Rapamycin | 0.322 | -0.601 |
| Tcell | -0.44 | -0.085 |
| GMCSF | -0.143 | 0.15 |
| IFNab | -0.759 | 0.094 |
| IFNg | 0.043 | -1.04 |
| IFNg_GMCSF1 | 0.459 | 0.195 |
| Rv1432_day32 | 0.67 | 0.873 |
| Rv1565c_day32 | -0.924 | -0.641 |
| secA2_input | -0.348 | 0.346 |
| delta_Rv3594 | -0.791 | 0.239 |
| delta_Rv3717 | -0.395 | -0.891 |
| delta_Rv3811 | -0.714 | 0.068 |
| delta_Rv0954 | -1.23 | -0.317 |
| PonA1 | -0.491 | -0.431 |
| EccD1_KO | 0.089 | -0.681 |
| EspI_KO | -0.391 | -0.764 |
| PE35_KO | 0.07 | -0.473 |
| PPE68_KO | -0.243 | -1.024 |
| glycerol2 | 0.647 | -0.014 |
| lignocerate | 0.549 | -0.057 |
| oleate | 0.275 | -0.143 |
| phosphatidylcholine | 0.37 | -0.371 |
| acetate | 0.291 | -0.514 |
| glucAc | 0.318 | -0.65 |
| Rv0950ko | -0.039 | -0.359 |
| Rv1096ko | -0.196 | -0.455 |
| Rv3684ko | 0.17 | -0.285 |
| delta_otsA_trehalose | -0.057 | 1.032 |