Top 10 genes with highest correlation to Rv0136/cyp138:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2633c/- | (cc=0.6733) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6619) | info on Rv3295/- |
| Rv0758/phoR | (cc=0.6485) | info on Rv0758/phoR |
| Rv3605c/- | (cc=0.6273) | info on Rv3605c/- |
| Rv3059/cyp136 | (cc=0.6267) | info on Rv3059/cyp136 |
| Rv1180/pks3 | (cc=0.6171) | info on Rv1180/pks3 |
| Rv2636/- | (cc=0.6164) | info on Rv2636/- |
| Rv3354/- | (cc=0.6154) | info on Rv3354/- |
| Rv3058c/- | (cc=0.6119) | info on Rv3058c/- |
| Rv3641c/fic | (cc=0.6002) | info on Rv3641c/fic |
Correlation of Rv0136/cyp138 with Rv3295/-
Normalized LFCs for Rv0136/cyp138:
(description and provenance of datasets)
| Rv0136/cyp138 | Rv3295/- | |
| Fe_supp_jason_reseq | -0.399 | -0.311 |
| low_pH_jason_reseq | 0.062 | -1.467 |
| NO_jason_reseq | -0.436 | 0.399 |
| B6_jason_reseq | 1.033 | 1.709 |
| MHCII_jason_reseq | 0.94 | 2.745 |
| Isoniazid02 | -0.674 | -0.08 |
| Rifampicin4 | 0.081 | -0.736 |
| Ethambutol3 | 0.119 | -0.766 |
| Meropenem3 | -0.53 | 1.594 |
| Vancomycin16 | -0.279 | -2.144 |
| Rv2680_day32 | 0.381 | -0.028 |
| H37Rv_KO_MarP | 0.604 | 0.872 |
| hypoxia_3wks | 0.108 | 0.04 |
| hypoxia_6wks | 0.601 | 0.069 |
| glycerol | -1.565 | -1.066 |
| cholesterol | -1.209 | -0.911 |
| AJ | 0.366 | -0.094 |
| Bibs02 | -0.246 | -0.197 |
| Bibs02c | -0.355 | -0.488 |
| BL6 | -0.418 | -1.617 |
| BL6a | -0.73 | -1.21 |
| BXD01 | -0.861 | -2.04 |
| BXD010 | -0.353 | -1.261 |
| BXD011 | -0.795 | -1.45 |
| BXD03 | -0.95 | -1.975 |
| BXD04 | -1.025 | -1.206 |
| BXD05 | -0.967 | -1.799 |
| BXD06 | -0.847 | -1.84 |
| BXD07 | -1.073 | -1.907 |
| BXD08 | -0.598 | -2.202 |
| BXD09 | -0.85 | -1.692 |
| CAST | 0.093 | -0.377 |
| CCcont | -1.132 | -2.55 |
| DS01 | -0.296 | -0.573 |
| DS02 | -0.961 | -0.243 |
| DS04 | -0.386 | -1.214 |
| DS0c | -0.368 | -0.159 |
| GP01 | -1.008 | -0.495 |
| GP02 | 0.164 | -1.862 |
| GP0c | -0.838 | -3.192 |
| NOD | 0.091 | 0.265 |
| NZO | 0.286 | 0.438 |
| PWK | 0.095 | -0.034 |
| H37Rv_KO_CtpC | -0.55 | -1.189 |
| H37Rv_KO_CtpD | -1.034 | -0.309 |
| H37Rv_KO_Rv1272 | -0.984 | -0.822 |
| H37Rv_KO_SugABC | -0.604 | -1.536 |
| H37Rv_KO_MbtN | 0.014 | -2.764 |
| Trans05 | 0.104 | -1.09 |
| macrophage_unactivated | -0.597 | -3.033 |
| IL1 | -1.258 | -2.637 |
| Rapamycin | -0.724 | -2.998 |
| Tcell | -0.929 | -2.77 |
| GMCSF | -0.378 | -2.389 |
| IFNab | -0.432 | -4.099 |
| IFNg | -0.919 | -1.86 |
| IFNg_GMCSF1 | -0.896 | -1.555 |
| Rv1432_day32 | 1.098 | 0.528 |
| Rv1565c_day32 | 0.655 | 1.414 |
| secA2_input | 0.792 | 0.819 |
| delta_Rv3594 | -0.737 | -0.159 |
| delta_Rv3717 | -0.788 | -0.35 |
| delta_Rv3811 | -0.446 | -0.437 |
| delta_Rv0954 | -0.342 | -0.012 |
| PonA1 | -0.11 | 0.697 |
| EccD1_KO | 0.115 | -0.536 |
| EspI_KO | 0.214 | -0.442 |
| PE35_KO | -0.166 | -0.096 |
| PPE68_KO | 0.09 | 0.067 |
| glycerol2 | 1.229 | 2.42 |
| lignocerate | 0.911 | 1.125 |
| oleate | 1.002 | -0.113 |
| phosphatidylcholine | 0.871 | 2.459 |
| acetate | 0.505 | 0.436 |
| glucAc | 0.432 | 0.323 |
| Rv0950ko | 0.268 | 1.019 |
| Rv1096ko | -0.045 | 0.338 |
| Rv3684ko | -0.18 | 0.907 |
| delta_otsA_trehalose | -0.022 | 0.261 |