TnSeqCorr

Top 10 genes with highest correlation to Rv0131c/fadE1:

update plotcorrelationlink to info on gene
Rv1598c/- (cc=0.5109) info on Rv1598c/-
Rv2970A/- (cc=0.4673) info on Rv2970A/-
Rv2330c/lppP (cc=0.4658) info on Rv2330c/lppP
Rv0804/- (cc=0.4569) info on Rv0804/-
Rv3153/nuoI (cc=0.4555) info on Rv3153/nuoI
Rv1471/trxB1 (cc=0.4552) info on Rv1471/trxB1
Rv3146/nuoB (cc=0.4506) info on Rv3146/nuoB
Rv1831/- (cc=0.4461) info on Rv1831/-
Rv0844c/narL (cc=0.4298) info on Rv0844c/narL
Rv2852c/mqo (cc=0.4238) info on Rv2852c/mqo

Correlation of Rv0131c/fadE1 with Rv0844c/narL

Normalized LFCs for Rv0131c/fadE1:
(description and provenance of datasets)
Rv0131c/fadE1Rv0844c/narL
Fe_supp_jason_reseq

-0.808

-0.821

low_pH_jason_reseq

0.592

-0.885

NO_jason_reseq

-0.457

-0.798

B6_jason_reseq

-0.523

-1.434

MHCII_jason_reseq

-0.06

-1.717

Isoniazid02

0.081

-0.1

Rifampicin4

-0.525

0.208

Ethambutol3

0.582

1.001

Meropenem3

-0.448

0.189

Vancomycin16

-0.186

-0.342

Rv2680_day32

0.885

0.584

H37Rv_KO_MarP

0.021

0.126

hypoxia_3wks

0.0

-0.167

hypoxia_6wks

1.128

-0.334

glycerol

0.743

1.508

cholesterol

-0.018

0.542

AJ

-0.059

0.509

Bibs02

-0.497

-0.719

Bibs02c

0.576

-0.943

BL6

0.99

1.836

BL6a

0.323

1.204

BXD01

0.432

0.829

BXD010

1.21

0.842

BXD011

0.938

1.187

BXD03

1.038

1.108

BXD04

0.375

1.469

BXD05

0.37

0.771

BXD06

0.538

0.426

BXD07

1.294

0.737

BXD08

0.747

1.32

BXD09

1.129

1.096

CAST

0.375

0.282

CCcont

0.425

1.334

DS01

-0.25

0.224

DS02

-0.23

-0.191

DS04

-1.152

-0.17

DS0c

0.053

-0.358

GP01

-0.352

1.085

GP02

-0.161

2.145

GP0c

-1.174

1.153

NOD

-0.238

-0.884

NZO

0.429

0.337

PWK

-0.566

-0.254

H37Rv_KO_CtpC

0.462

1.893

H37Rv_KO_CtpD

0.757

1.565

H37Rv_KO_Rv1272

1.012

2.107

H37Rv_KO_SugABC

0.813

1.083

H37Rv_KO_MbtN

0.834

1.304

Trans05

0.36

1.91

macrophage_unactivated

-0.767

0.707

IL1

0.196

0.507

Rapamycin

0.203

0.319

Tcell

-0.665

0.417

GMCSF

0.116

1.127

IFNab

-0.136

0.753

IFNg

0.176

0.214

IFNg_GMCSF1

1.251

0.277

Rv1432_day32

0.588

0.675

Rv1565c_day32

-0.319

0.215

secA2_input

1.066

-0.549

delta_Rv3594

-0.595

-0.912

delta_Rv3717

-0.05

-0.745

delta_Rv3811

-0.455

-1.019

delta_Rv0954

-0.817

-0.574

PonA1

0.516

-0.895

EccD1_KO

0.506

-0.03

EspI_KO

0.833

0.876

PE35_KO

0.656

0.528

PPE68_KO

0.582

0.627

glycerol2

1.442

0.659

lignocerate

0.17

0.951

oleate

0.815

1.168

phosphatidylcholine

0.475

0.808

acetate

0.856

-0.136

glucAc

0.398

0.086

Rv0950ko

0.0

-0.075

Rv1096ko

0.374

0.169

Rv3684ko

0.357

-0.429

delta_otsA_trehalose

-1.683

-1.055