Top 10 genes with highest correlation to Rv0116c/ldtA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2748c/ftsK | (cc=0.5142) | info on Rv2748c/ftsK |
| Rv2678c/hemE | (cc=0.4702) | info on Rv2678c/hemE |
| Rv2373c/dnaJ2 | (cc=0.4691) | info on Rv2373c/dnaJ2 |
| Rv3673c/- | (cc=0.4598) | info on Rv3673c/- |
| Rv0701/rplC | (cc=0.4575) | info on Rv0701/rplC |
| Rv3753c/- | (cc=0.4515) | info on Rv3753c/- |
| Rv0237/lpqI | (cc=0.4405) | info on Rv0237/lpqI |
| Rv2882c/frr | (cc=0.4315) | info on Rv2882c/frr |
| Rv3858c/gltD | (cc=0.4309) | info on Rv3858c/gltD |
| Rv2164c/- | (cc=0.4269) | info on Rv2164c/- |
Correlation of Rv0116c/ldtA with Rv2882c/frr
Normalized LFCs for Rv0116c/ldtA:
(description and provenance of datasets)
| Rv0116c/ldtA | Rv2882c/frr | |
| Fe_supp_jason_reseq | 1.223 | 0.0 |
| low_pH_jason_reseq | 0.542 | 0.0 |
| NO_jason_reseq | -0.953 | 0.0 |
| B6_jason_reseq | -0.136 | 0.0 |
| MHCII_jason_reseq | 1.177 | 0.0 |
| Isoniazid02 | -0.944 | -0.201 |
| Rifampicin4 | -0.311 | 0.341 |
| Ethambutol3 | -0.423 | 0.293 |
| Meropenem3 | 0.018 | 0.0 |
| Vancomycin16 | -0.923 | 0.923 |
| Rv2680_day32 | -0.459 | 0.0 |
| H37Rv_KO_MarP | 0.636 | 0.371 |
| hypoxia_3wks | 0.12 | 0.0 |
| hypoxia_6wks | -0.562 | 0.0 |
| glycerol | -0.74 | -0.202 |
| cholesterol | -0.43 | -0.145 |
| AJ | 0.329 | 0.212 |
| Bibs02 | 0.139 | -0.183 |
| Bibs02c | -0.288 | 0.527 |
| BL6 | 0.473 | -0.125 |
| BL6a | -0.187 | -0.198 |
| BXD01 | 0.342 | -0.13 |
| BXD010 | -0.297 | -0.128 |
| BXD011 | -0.519 | -0.127 |
| BXD03 | 0.336 | 0.0 |
| BXD04 | -0.304 | -0.124 |
| BXD05 | -0.07 | -0.135 |
| BXD06 | 0.241 | 0.762 |
| BXD07 | 0.0 | -0.138 |
| BXD08 | 0.044 | -0.133 |
| BXD09 | 0.077 | -0.14 |
| CAST | 0.063 | -0.23 |
| CCcont | 0.517 | -0.149 |
| DS01 | 0.216 | -0.236 |
| DS02 | -0.314 | -0.217 |
| DS04 | -0.17 | -0.194 |
| DS0c | -0.113 | 0.0 |
| GP01 | -0.461 | -0.099 |
| GP02 | 0.274 | -0.083 |
| GP0c | -0.714 | -0.13 |
| NOD | 0.57 | -0.225 |
| NZO | 0.088 | 0.182 |
| PWK | 0.149 | 1.009 |
| H37Rv_KO_CtpC | -1.037 | -0.162 |
| H37Rv_KO_CtpD | -0.32 | -0.127 |
| H37Rv_KO_Rv1272 | 0.114 | -0.141 |
| H37Rv_KO_SugABC | 0.6 | -0.099 |
| H37Rv_KO_MbtN | -0.759 | -0.103 |
| Trans05 | 0.514 | -0.131 |
| macrophage_unactivated | 0.243 | 0.0 |
| IL1 | 0.228 | 0.0 |
| Rapamycin | 0.236 | 0.0 |
| Tcell | 0.459 | 0.0 |
| GMCSF | 0.903 | 0.0 |
| IFNab | 0.481 | 0.0 |
| IFNg | 0.786 | 0.0 |
| IFNg_GMCSF1 | 0.415 | 0.0 |
| Rv1432_day32 | -0.106 | 0.0 |
| Rv1565c_day32 | -0.491 | 0.0 |
| secA2_input | 0.116 | 0.568 |
| delta_Rv3594 | -0.312 | -0.176 |
| delta_Rv3717 | 0.12 | -0.477 |
| delta_Rv3811 | 0.122 | -0.564 |
| delta_Rv0954 | 0.018 | -0.49 |
| PonA1 | 0.103 | -0.437 |
| EccD1_KO | -0.72 | -2.519 |
| EspI_KO | -1.201 | -2.185 |
| PE35_KO | -1.873 | -2.234 |
| PPE68_KO | -1.565 | -2.451 |
| glycerol2 | -0.153 | 0.0 |
| lignocerate | 0.346 | 0.0 |
| oleate | -1.452 | 0.0 |
| phosphatidylcholine | 1.043 | 0.0 |
| acetate | 0.337 | 0.0 |
| glucAc | 0.908 | 0.0 |
| Rv0950ko | 0.112 | 1.462 |
| Rv1096ko | 0.253 | 1.143 |
| Rv3684ko | 0.102 | 0.0 |
| delta_otsA_trehalose | -0.253 | 0.0 |