Top 10 genes with highest correlation to Rv0107c/ctpI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1185c/fadD21 | (cc=0.5257) | info on Rv1185c/fadD21 |
| Rv1181/pks4 | (cc=0.5153) | info on Rv1181/pks4 |
| Rv0783c/emrB | (cc=0.5092) | info on Rv0783c/emrB |
| Rv2768c/PPE43 | (cc=0.4999) | info on Rv2768c/PPE43 |
| Rv1974/- | (cc=0.4968) | info on Rv1974/- |
| Rv1187/rocA | (cc=0.4826) | info on Rv1187/rocA |
| Rv1180/pks3 | (cc=0.477) | info on Rv1180/pks3 |
| Rv1549/fadD11.1 | (cc=0.4758) | info on Rv1549/fadD11.1 |
| Rv1182/papA3 | (cc=0.47) | info on Rv1182/papA3 |
| Rv0570/nrdZ | (cc=0.4691) | info on Rv0570/nrdZ |
Correlation of Rv0107c/ctpI with Rv0570/nrdZ
Normalized LFCs for Rv0107c/ctpI:
(description and provenance of datasets)
| Rv0107c/ctpI | Rv0570/nrdZ | |
| Fe_supp_jason_reseq | 0.148 | 0.022 |
| low_pH_jason_reseq | 0.577 | 0.694 |
| NO_jason_reseq | -0.053 | 0.599 |
| B6_jason_reseq | 0.902 | 0.881 |
| MHCII_jason_reseq | 0.669 | 1.017 |
| Isoniazid02 | -0.118 | -0.597 |
| Rifampicin4 | 0.325 | 0.217 |
| Ethambutol3 | 0.451 | -0.499 |
| Meropenem3 | 0.229 | -1.562 |
| Vancomycin16 | 0.241 | -0.756 |
| Rv2680_day32 | 0.669 | 0.579 |
| H37Rv_KO_MarP | 0.089 | 0.155 |
| hypoxia_3wks | -0.395 | -0.778 |
| hypoxia_6wks | 0.0 | 0.0 |
| glycerol | 0.24 | -0.424 |
| cholesterol | 0.257 | -0.813 |
| AJ | 0.235 | -0.565 |
| Bibs02 | 0.427 | 0.441 |
| Bibs02c | -0.168 | -0.321 |
| BL6 | 0.047 | -0.079 |
| BL6a | -0.244 | -0.874 |
| BXD01 | 0.0 | -0.615 |
| BXD010 | -0.103 | -1.262 |
| BXD011 | -0.257 | -0.994 |
| BXD03 | -0.053 | -0.364 |
| BXD04 | 0.023 | -0.666 |
| BXD05 | 0.013 | -0.027 |
| BXD06 | -0.384 | -0.616 |
| BXD07 | 0.026 | -0.582 |
| BXD08 | -0.026 | -0.533 |
| BXD09 | -0.027 | -0.741 |
| CAST | -0.068 | -0.112 |
| CCcont | 0.24 | -0.612 |
| DS01 | 0.281 | 0.048 |
| DS02 | 0.421 | 0.17 |
| DS04 | 0.639 | 0.58 |
| DS0c | 0.181 | 0.264 |
| GP01 | -0.079 | -0.543 |
| GP02 | -0.076 | -0.239 |
| GP0c | -0.608 | -0.508 |
| NOD | 0.267 | -0.666 |
| NZO | 1.347 | -0.608 |
| PWK | 0.129 | 0.117 |
| H37Rv_KO_CtpC | -0.552 | -0.249 |
| H37Rv_KO_CtpD | 0.408 | -0.572 |
| H37Rv_KO_Rv1272 | -1.165 | -1.294 |
| H37Rv_KO_SugABC | 0.574 | -0.942 |
| H37Rv_KO_MbtN | 0.217 | 0.18 |
| Trans05 | -0.311 | 0.35 |
| macrophage_unactivated | -0.038 | -0.789 |
| IL1 | 0.036 | -0.567 |
| Rapamycin | -0.077 | -0.411 |
| Tcell | -0.834 | -0.622 |
| GMCSF | 0.372 | -0.504 |
| IFNab | 0.493 | -0.157 |
| IFNg | 0.192 | -0.104 |
| IFNg_GMCSF1 | 0.299 | 0.531 |
| Rv1432_day32 | 0.714 | -0.218 |
| Rv1565c_day32 | 0.408 | 0.785 |
| secA2_input | 0.285 | 0.432 |
| delta_Rv3594 | 0.031 | 0.581 |
| delta_Rv3717 | 0.097 | 0.38 |
| delta_Rv3811 | 0.196 | 0.402 |
| delta_Rv0954 | 0.39 | 0.194 |
| PonA1 | 0.421 | -0.046 |
| EccD1_KO | 0.22 | 0.553 |
| EspI_KO | 0.419 | 0.051 |
| PE35_KO | 0.563 | 0.58 |
| PPE68_KO | 0.214 | 0.589 |
| glycerol2 | 0.625 | 1.04 |
| lignocerate | 0.798 | 1.727 |
| oleate | 0.051 | 0.245 |
| phosphatidylcholine | 0.451 | 1.147 |
| acetate | 0.559 | 1.072 |
| glucAc | 0.653 | 1.2 |
| Rv0950ko | -0.262 | 0.41 |
| Rv1096ko | 0.151 | 0.648 |
| Rv3684ko | -0.056 | 0.55 |
| delta_otsA_trehalose | 0.032 | 0.023 |