Top 10 genes with highest correlation to Rv0098/fcoT:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0101/nrp | (cc=0.7863) | info on Rv0101/nrp |
| Rv0097/- | (cc=0.7585) | info on Rv0097/- |
| Rv2069/sigC | (cc=0.7583) | info on Rv2069/sigC |
| Rv0096/PPE1 | (cc=0.678) | info on Rv0096/PPE1 |
| Rv0099/fadD10 | (cc=0.6729) | info on Rv0099/fadD10 |
| Rv0100/- | (cc=0.6354) | info on Rv0100/- |
| Rv1109c/- | (cc=0.6163) | info on Rv1109c/- |
| Rv1235/lpqY | (cc=0.5867) | info on Rv1235/lpqY |
| Rv3868/eccA1 | (cc=0.5809) | info on Rv3868/eccA1 |
| Rv2605c/tesB2 | (cc=0.574) | info on Rv2605c/tesB2 |
Correlation of Rv0098/fcoT with Rv0101/nrp
Normalized LFCs for Rv0098/fcoT:
(description and provenance of datasets)
| Rv0098/fcoT | Rv0101/nrp | |
| Fe_supp_jason_reseq | -1.288 | -0.475 |
| low_pH_jason_reseq | -0.261 | 0.0 |
| NO_jason_reseq | -0.656 | 0.037 |
| B6_jason_reseq | -1.004 | -1.33 |
| MHCII_jason_reseq | -2.403 | -2.431 |
| Isoniazid02 | 0.173 | 0.493 |
| Rifampicin4 | -0.349 | -0.319 |
| Ethambutol3 | -0.051 | 0.604 |
| Meropenem3 | -0.21 | 0.788 |
| Vancomycin16 | 0.605 | -0.154 |
| Rv2680_day32 | -1.501 | -2.166 |
| H37Rv_KO_MarP | -0.69 | 0.257 |
| hypoxia_3wks | -0.299 | 0.06 |
| hypoxia_6wks | -0.211 | 0.0 |
| glycerol | -1.612 | -0.037 |
| cholesterol | -0.304 | 1.361 |
| AJ | -3.718 | -3.82 |
| Bibs02 | -1.042 | -1.358 |
| Bibs02c | -0.293 | -0.732 |
| BL6 | -0.936 | -1.049 |
| BL6a | -1.012 | -1.621 |
| BXD01 | -0.522 | -1.449 |
| BXD010 | -0.868 | -0.882 |
| BXD011 | -0.324 | -1.018 |
| BXD03 | -0.856 | -0.908 |
| BXD04 | 0.014 | -1.14 |
| BXD05 | -1.04 | -0.904 |
| BXD06 | -1.502 | -1.934 |
| BXD07 | -0.555 | -1.08 |
| BXD08 | 0.665 | -0.433 |
| BXD09 | -1.313 | -1.564 |
| CAST | -3.821 | -3.177 |
| CCcont | 0.884 | -0.599 |
| DS01 | 0.188 | 0.337 |
| DS02 | 2.163 | 1.878 |
| DS04 | -0.523 | -1.789 |
| DS0c | -0.132 | -0.226 |
| GP01 | -2.056 | -1.073 |
| GP02 | -1.891 | -1.148 |
| GP0c | -1.253 | -0.149 |
| NOD | -3.363 | -2.023 |
| NZO | -3.689 | -3.664 |
| PWK | -3.768 | -3.066 |
| H37Rv_KO_CtpC | -2.278 | -1.607 |
| H37Rv_KO_CtpD | 0.116 | -0.196 |
| H37Rv_KO_Rv1272 | -0.086 | -0.643 |
| H37Rv_KO_SugABC | 1.904 | 0.527 |
| H37Rv_KO_MbtN | -0.567 | 0.485 |
| Trans05 | 0.228 | -0.73 |
| macrophage_unactivated | 1.742 | 0.786 |
| IL1 | -0.801 | -0.653 |
| Rapamycin | -0.258 | -0.325 |
| Tcell | 1.007 | -0.228 |
| GMCSF | 3.332 | 0.911 |
| IFNab | 1.206 | 1.394 |
| IFNg | 0.374 | 0.219 |
| IFNg_GMCSF1 | 1.254 | 0.408 |
| Rv1432_day32 | -1.304 | -2.588 |
| Rv1565c_day32 | -1.164 | -3.349 |
| secA2_input | 0.355 | 0.348 |
| delta_Rv3594 | 0.979 | -0.257 |
| delta_Rv3717 | 0.544 | -0.045 |
| delta_Rv3811 | 1.437 | 0.152 |
| delta_Rv0954 | -0.384 | 0.152 |
| PonA1 | -1.193 | -1.675 |
| EccD1_KO | -0.105 | -0.132 |
| EspI_KO | 0.305 | -0.188 |
| PE35_KO | -0.14 | -0.155 |
| PPE68_KO | 0.15 | -0.211 |
| glycerol2 | -0.043 | 0.052 |
| lignocerate | 0.301 | -0.222 |
| oleate | -0.106 | -0.352 |
| phosphatidylcholine | 0.0 | -0.286 |
| acetate | -0.198 | -0.032 |
| glucAc | 0.042 | -0.02 |
| Rv0950ko | 0.314 | -0.096 |
| Rv1096ko | 0.314 | 1.028 |
| Rv3684ko | -0.763 | 0.403 |
| delta_otsA_trehalose | 1.894 | 0.119 |