Top 10 genes with highest correlation to Rv0096/PPE1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2069/sigC | (cc=0.8771) | info on Rv2069/sigC |
| Rv0101/nrp | (cc=0.7677) | info on Rv0101/nrp |
| Rv0097/- | (cc=0.7665) | info on Rv0097/- |
| Rv0099/fadD10 | (cc=0.7008) | info on Rv0099/fadD10 |
| Rv0098/fcoT | (cc=0.678) | info on Rv0098/fcoT |
| Rv0100/- | (cc=0.6389) | info on Rv0100/- |
| Rv1109c/- | (cc=0.5912) | info on Rv1109c/- |
| Rv2734/- | (cc=0.544) | info on Rv2734/- |
| Rv2849c/cobO | (cc=0.5343) | info on Rv2849c/cobO |
| Rv3560c/fadE30 | (cc=0.5224) | info on Rv3560c/fadE30 |
Correlation of Rv0096/PPE1 with Rv2069/sigC
Normalized LFCs for Rv0096/PPE1:
(description and provenance of datasets)
| Rv0096/PPE1 | Rv2069/sigC | |
| Fe_supp_jason_reseq | 0.527 | -0.128 |
| low_pH_jason_reseq | 0.723 | -0.119 |
| NO_jason_reseq | 0.053 | 0.462 |
| B6_jason_reseq | -1.397 | -2.033 |
| MHCII_jason_reseq | -2.734 | -3.645 |
| Isoniazid02 | -0.16 | -0.362 |
| Rifampicin4 | 0.485 | 0.309 |
| Ethambutol3 | 1.463 | -0.439 |
| Meropenem3 | 0.406 | -1.061 |
| Vancomycin16 | 0.244 | -0.47 |
| Rv2680_day32 | -1.629 | -2.541 |
| H37Rv_KO_MarP | 0.381 | -0.037 |
| hypoxia_3wks | -0.132 | -0.455 |
| hypoxia_6wks | -0.173 | -0.576 |
| glycerol | -0.026 | -0.085 |
| cholesterol | 0.121 | 0.617 |
| AJ | -4.555 | -5.946 |
| Bibs02 | -1.387 | -2.356 |
| Bibs02c | -0.588 | -0.18 |
| BL6 | -0.551 | -1.445 |
| BL6a | -1.106 | -1.238 |
| BXD01 | -0.952 | -1.302 |
| BXD010 | -0.745 | -1.236 |
| BXD011 | -0.949 | -1.081 |
| BXD03 | -0.415 | -1.843 |
| BXD04 | 0.016 | 0.16 |
| BXD05 | -0.487 | -1.081 |
| BXD06 | -1.209 | -2.687 |
| BXD07 | -0.638 | -1.013 |
| BXD08 | -0.072 | -1.029 |
| BXD09 | -0.954 | -1.683 |
| CAST | -3.904 | -5.119 |
| CCcont | 0.17 | 0.587 |
| DS01 | -0.265 | -1.305 |
| DS02 | 2.347 | 1.936 |
| DS04 | -2.202 | -2.282 |
| DS0c | -0.826 | -1.199 |
| GP01 | -0.466 | -1.777 |
| GP02 | -1.531 | -2.008 |
| GP0c | 0.267 | -0.301 |
| NOD | -3.458 | -3.642 |
| NZO | -4.193 | -5.46 |
| PWK | -4.44 | -4.735 |
| H37Rv_KO_CtpC | -1.446 | -1.144 |
| H37Rv_KO_CtpD | 0.3 | -0.641 |
| H37Rv_KO_Rv1272 | -0.593 | -0.508 |
| H37Rv_KO_SugABC | -0.061 | 0.098 |
| H37Rv_KO_MbtN | -0.519 | 0.242 |
| Trans05 | -0.176 | -0.834 |
| macrophage_unactivated | 0.584 | 1.657 |
| IL1 | -1.516 | -2.251 |
| Rapamycin | -1.777 | -1.697 |
| Tcell | -1.453 | -1.03 |
| GMCSF | 1.442 | 0.826 |
| IFNab | 1.675 | 3.217 |
| IFNg | 0.468 | 1.791 |
| IFNg_GMCSF1 | -0.342 | -0.666 |
| Rv1432_day32 | -2.885 | -3.819 |
| Rv1565c_day32 | -3.51 | -2.045 |
| secA2_input | -0.343 | -0.069 |
| delta_Rv3594 | 0.032 | -0.558 |
| delta_Rv3717 | 0.239 | 0.039 |
| delta_Rv3811 | 0.153 | -0.167 |
| delta_Rv0954 | -0.235 | 0.088 |
| PonA1 | -2.947 | -4.903 |
| EccD1_KO | -0.174 | 0.174 |
| EspI_KO | -0.402 | 0.319 |
| PE35_KO | -0.044 | 0.782 |
| PPE68_KO | 0.118 | 0.627 |
| glycerol2 | -5.133 | -3.511 |
| lignocerate | -0.119 | 1.103 |
| oleate | -4.29 | -2.823 |
| phosphatidylcholine | -0.753 | 0.182 |
| acetate | -0.462 | 0.258 |
| glucAc | -0.519 | 0.669 |
| Rv0950ko | -0.338 | -0.069 |
| Rv1096ko | -0.464 | -0.682 |
| Rv3684ko | -0.206 | -0.858 |
| delta_otsA_trehalose | 0.303 | 1.348 |