Top 10 genes with highest correlation to Rv0074/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0305c/PPE6 | (cc=0.4881) | info on Rv0305c/PPE6 |
| Rv0907/- | (cc=0.4872) | info on Rv0907/- |
| Rv1585c/- | (cc=0.4725) | info on Rv1585c/- |
| Rv0255c/cobQ1 | (cc=0.4664) | info on Rv0255c/cobQ1 |
| Rv0112/gca | (cc=0.4539) | info on Rv0112/gca |
| Rv3787c/- | (cc=0.4534) | info on Rv3787c/- |
| Rv3857c/- | (cc=0.452) | info on Rv3857c/- |
| Rv0822c/- | (cc=0.4427) | info on Rv0822c/- |
| Rv2430c/PPE41 | (cc=0.4233) | info on Rv2430c/PPE41 |
| Rv1664/pks9 | (cc=0.423) | info on Rv1664/pks9 |
Correlation of Rv0074/- with Rv3857c/-
Normalized LFCs for Rv0074/-:
(description and provenance of datasets)
| Rv0074/- | Rv3857c/- | |
| Fe_supp_jason_reseq | -0.65 | 0.483 |
| low_pH_jason_reseq | -0.172 | -0.313 |
| NO_jason_reseq | -0.105 | -0.11 |
| B6_jason_reseq | -0.694 | -0.528 |
| MHCII_jason_reseq | -0.122 | -0.032 |
| Isoniazid02 | -0.049 | 0.258 |
| Rifampicin4 | 0.208 | 0.368 |
| Ethambutol3 | 0.081 | -0.074 |
| Meropenem3 | 0.193 | 1.325 |
| Vancomycin16 | 0.374 | 0.371 |
| Rv2680_day32 | 0.247 | -0.66 |
| H37Rv_KO_MarP | 0.329 | 0.15 |
| hypoxia_3wks | 0.391 | 0.076 |
| hypoxia_6wks | 0.09 | 0.714 |
| glycerol | -0.799 | 0.622 |
| cholesterol | -0.351 | 0.186 |
| AJ | -0.067 | 0.163 |
| Bibs02 | -1.113 | 0.114 |
| Bibs02c | 0.02 | 1.507 |
| BL6 | -0.761 | -0.02 |
| BL6a | -0.019 | 1.478 |
| BXD01 | -0.212 | 0.741 |
| BXD010 | -0.1 | 1.076 |
| BXD011 | -0.152 | 0.564 |
| BXD03 | 0.276 | 0.506 |
| BXD04 | 0.012 | 0.98 |
| BXD05 | 0.487 | 0.211 |
| BXD06 | -0.174 | 0.209 |
| BXD07 | -0.32 | 0.458 |
| BXD08 | 0.609 | -0.271 |
| BXD09 | -0.276 | 0.354 |
| CAST | -0.204 | -0.028 |
| CCcont | -0.551 | 0.516 |
| DS01 | 0.743 | 1.081 |
| DS02 | 0.041 | 1.875 |
| DS04 | 0.663 | 0.943 |
| DS0c | 0.288 | 0.842 |
| GP01 | 0.036 | -0.824 |
| GP02 | 0.737 | 0.684 |
| GP0c | 0.246 | -0.115 |
| NOD | 1.417 | 2.579 |
| NZO | -0.709 | -0.779 |
| PWK | -0.153 | 1.708 |
| H37Rv_KO_CtpC | 0.578 | -0.634 |
| H37Rv_KO_CtpD | 0.125 | 1.678 |
| H37Rv_KO_Rv1272 | 0.311 | 1.285 |
| H37Rv_KO_SugABC | 1.183 | 1.318 |
| H37Rv_KO_MbtN | -0.01 | 1.061 |
| Trans05 | 1.075 | 0.668 |
| macrophage_unactivated | 0.051 | 0.139 |
| IL1 | -0.243 | 0.101 |
| Rapamycin | -0.147 | -0.595 |
| Tcell | 0.629 | 0.326 |
| GMCSF | 0.473 | -0.919 |
| IFNab | -0.508 | -0.166 |
| IFNg | 0.043 | -0.593 |
| IFNg_GMCSF1 | 0.383 | -0.487 |
| Rv1432_day32 | -0.485 | 1.901 |
| Rv1565c_day32 | -0.885 | -5.489 |
| secA2_input | -0.291 | -1.11 |
| delta_Rv3594 | -0.534 | -1.072 |
| delta_Rv3717 | -1.155 | -1.645 |
| delta_Rv3811 | -1.038 | -1.216 |
| delta_Rv0954 | -0.267 | -0.478 |
| PonA1 | 0.695 | -0.461 |
| EccD1_KO | -0.46 | -0.506 |
| EspI_KO | -1.132 | -2.099 |
| PE35_KO | -0.525 | -0.942 |
| PPE68_KO | -0.739 | -2.073 |
| glycerol2 | -0.161 | -0.915 |
| lignocerate | -0.532 | -1.059 |
| oleate | 0.047 | -1.018 |
| phosphatidylcholine | -0.531 | -1.335 |
| acetate | -0.379 | -2.051 |
| glucAc | -0.549 | -1.108 |
| Rv0950ko | -0.467 | -0.133 |
| Rv1096ko | 0.259 | 0.305 |
| Rv3684ko | -0.098 | 1.562 |
| delta_otsA_trehalose | 1.473 | -0.173 |