Top 10 genes with highest correlation to Rv0074/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0305c/PPE6 | (cc=0.4881) | info on Rv0305c/PPE6 |
| Rv0907/- | (cc=0.4872) | info on Rv0907/- |
| Rv1585c/- | (cc=0.4725) | info on Rv1585c/- |
| Rv0255c/cobQ1 | (cc=0.4664) | info on Rv0255c/cobQ1 |
| Rv0112/gca | (cc=0.4539) | info on Rv0112/gca |
| Rv3787c/- | (cc=0.4534) | info on Rv3787c/- |
| Rv3857c/- | (cc=0.452) | info on Rv3857c/- |
| Rv0822c/- | (cc=0.4427) | info on Rv0822c/- |
| Rv2430c/PPE41 | (cc=0.4233) | info on Rv2430c/PPE41 |
| Rv1664/pks9 | (cc=0.423) | info on Rv1664/pks9 |
Correlation of Rv0074/- with Rv1664/pks9
Normalized LFCs for Rv0074/-:
(description and provenance of datasets)
| Rv0074/- | Rv1664/pks9 | |
| Fe_supp_jason_reseq | -0.65 | 0.611 |
| low_pH_jason_reseq | -0.172 | 0.045 |
| NO_jason_reseq | -0.105 | 0.142 |
| B6_jason_reseq | -0.694 | -0.828 |
| MHCII_jason_reseq | -0.122 | -0.823 |
| Isoniazid02 | -0.049 | -0.615 |
| Rifampicin4 | 0.208 | 0.317 |
| Ethambutol3 | 0.081 | -0.916 |
| Meropenem3 | 0.193 | -0.43 |
| Vancomycin16 | 0.374 | -0.066 |
| Rv2680_day32 | 0.247 | -0.348 |
| H37Rv_KO_MarP | 0.329 | 0.185 |
| hypoxia_3wks | 0.391 | 0.1 |
| hypoxia_6wks | 0.09 | -0.109 |
| glycerol | -0.799 | 0.835 |
| cholesterol | -0.351 | 0.203 |
| AJ | -0.067 | -0.294 |
| Bibs02 | -1.113 | -0.642 |
| Bibs02c | 0.02 | -0.735 |
| BL6 | -0.761 | 0.357 |
| BL6a | -0.019 | 0.426 |
| BXD01 | -0.212 | 0.843 |
| BXD010 | -0.1 | 0.699 |
| BXD011 | -0.152 | 0.761 |
| BXD03 | 0.276 | 0.258 |
| BXD04 | 0.012 | 0.914 |
| BXD05 | 0.487 | 1.375 |
| BXD06 | -0.174 | 0.775 |
| BXD07 | -0.32 | 0.961 |
| BXD08 | 0.609 | 0.75 |
| BXD09 | -0.276 | 0.524 |
| CAST | -0.204 | -0.215 |
| CCcont | -0.551 | 0.618 |
| DS01 | 0.743 | 0.33 |
| DS02 | 0.041 | 0.246 |
| DS04 | 0.663 | 0.597 |
| DS0c | 0.288 | 0.717 |
| GP01 | 0.036 | 1.902 |
| GP02 | 0.737 | -0.078 |
| GP0c | 0.246 | 0.564 |
| NOD | 1.417 | -0.21 |
| NZO | -0.709 | -0.061 |
| PWK | -0.153 | -0.315 |
| H37Rv_KO_CtpC | 0.578 | 0.828 |
| H37Rv_KO_CtpD | 0.125 | 1.22 |
| H37Rv_KO_Rv1272 | 0.311 | 1.456 |
| H37Rv_KO_SugABC | 1.183 | 1.39 |
| H37Rv_KO_MbtN | -0.01 | 0.294 |
| Trans05 | 1.075 | 1.335 |
| macrophage_unactivated | 0.051 | 0.997 |
| IL1 | -0.243 | 0.866 |
| Rapamycin | -0.147 | 1.182 |
| Tcell | 0.629 | 1.105 |
| GMCSF | 0.473 | 1.017 |
| IFNab | -0.508 | 0.955 |
| IFNg | 0.043 | 0.906 |
| IFNg_GMCSF1 | 0.383 | 0.525 |
| Rv1432_day32 | -0.485 | -0.142 |
| Rv1565c_day32 | -0.885 | 0.531 |
| secA2_input | -0.291 | -0.65 |
| delta_Rv3594 | -0.534 | -0.311 |
| delta_Rv3717 | -1.155 | -1.008 |
| delta_Rv3811 | -1.038 | -0.47 |
| delta_Rv0954 | -0.267 | -0.74 |
| PonA1 | 0.695 | -0.744 |
| EccD1_KO | -0.46 | -0.549 |
| EspI_KO | -1.132 | -0.935 |
| PE35_KO | -0.525 | -0.563 |
| PPE68_KO | -0.739 | -0.454 |
| glycerol2 | -0.161 | -0.862 |
| lignocerate | -0.532 | -0.721 |
| oleate | 0.047 | -0.364 |
| phosphatidylcholine | -0.531 | -0.623 |
| acetate | -0.379 | -0.806 |
| glucAc | -0.549 | -0.808 |
| Rv0950ko | -0.467 | -0.371 |
| Rv1096ko | 0.259 | 0.277 |
| Rv3684ko | -0.098 | -0.665 |
| delta_otsA_trehalose | 1.473 | 1.396 |