Top 10 genes with highest correlation to Rv0073/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0160c/PE4 | (cc=0.5614) | info on Rv0160c/PE4 |
| Rv2431c/PE25 | (cc=0.5486) | info on Rv2431c/PE25 |
| Rv2352c/PPE38 | (cc=0.5416) | info on Rv2352c/PPE38 |
| Rv3045/adhC | (cc=0.53) | info on Rv3045/adhC |
| Rv0456B/mazE1 | (cc=0.5264) | info on Rv0456B/mazE1 |
| Rv0197/- | (cc=0.5135) | info on Rv0197/- |
| Rv3404c/- | (cc=0.5038) | info on Rv3404c/- |
| Rv3814c/- | (cc=0.4958) | info on Rv3814c/- |
| Rv2957/- | (cc=0.4929) | info on Rv2957/- |
| Rv2472/- | (cc=0.4893) | info on Rv2472/- |
Correlation of Rv0073/- with Rv2472/-
Normalized LFCs for Rv0073/-:
(description and provenance of datasets)
| Rv0073/- | Rv2472/- | |
| Fe_supp_jason_reseq | -0.133 | 0.273 |
| low_pH_jason_reseq | -0.422 | -0.089 |
| NO_jason_reseq | -0.761 | 1.488 |
| B6_jason_reseq | 0.152 | -0.235 |
| MHCII_jason_reseq | -0.392 | 0.931 |
| Isoniazid02 | -1.654 | -1.668 |
| Rifampicin4 | -0.801 | -1.01 |
| Ethambutol3 | -0.55 | -0.697 |
| Meropenem3 | -1.17 | -1.69 |
| Vancomycin16 | -1.141 | -0.56 |
| Rv2680_day32 | 0.489 | 0.382 |
| H37Rv_KO_MarP | 0.0 | -0.15 |
| hypoxia_3wks | -0.203 | 0.128 |
| hypoxia_6wks | -0.244 | 0.044 |
| glycerol | 0.812 | 0.114 |
| cholesterol | 0.242 | 1.028 |
| AJ | -0.076 | 0.541 |
| Bibs02 | 0.755 | 0.576 |
| Bibs02c | 0.915 | 0.846 |
| BL6 | 0.766 | 0.116 |
| BL6a | 0.042 | 0.352 |
| BXD01 | 0.451 | 0.761 |
| BXD010 | 0.271 | 0.509 |
| BXD011 | -0.245 | 1.007 |
| BXD03 | 0.36 | 0.064 |
| BXD04 | 0.559 | -0.404 |
| BXD05 | 0.599 | 0.604 |
| BXD06 | 0.259 | 0.237 |
| BXD07 | 0.015 | -0.082 |
| BXD08 | -0.198 | -0.507 |
| BXD09 | 0.235 | -0.083 |
| CAST | 0.143 | 0.294 |
| CCcont | -0.04 | -1.266 |
| DS01 | 1.3 | 1.408 |
| DS02 | 0.553 | 0.277 |
| DS04 | 0.41 | 1.081 |
| DS0c | 0.903 | 1.571 |
| GP01 | 0.275 | -1.322 |
| GP02 | 0.285 | -0.198 |
| GP0c | -0.336 | -0.799 |
| NOD | 0.395 | -1.051 |
| NZO | 0.306 | 0.0 |
| PWK | 0.796 | 0.632 |
| H37Rv_KO_CtpC | 0.467 | 0.031 |
| H37Rv_KO_CtpD | 1.33 | 0.256 |
| H37Rv_KO_Rv1272 | 0.816 | -0.129 |
| H37Rv_KO_SugABC | -0.049 | 2.094 |
| H37Rv_KO_MbtN | -0.225 | -0.258 |
| Trans05 | 1.018 | 0.402 |
| macrophage_unactivated | 0.208 | -1.139 |
| IL1 | 0.08 | -0.833 |
| Rapamycin | 0.338 | 2.087 |
| Tcell | 0.277 | -0.717 |
| GMCSF | -0.256 | -2.226 |
| IFNab | -0.187 | -0.532 |
| IFNg | -0.241 | -0.628 |
| IFNg_GMCSF1 | -0.512 | -0.836 |
| Rv1432_day32 | -0.489 | 0.258 |
| Rv1565c_day32 | -0.092 | -1.085 |
| secA2_input | 0.269 | 0.466 |
| delta_Rv3594 | -0.17 | -0.288 |
| delta_Rv3717 | -0.341 | -0.998 |
| delta_Rv3811 | -0.439 | -0.071 |
| delta_Rv0954 | -0.134 | -1.875 |
| PonA1 | -0.008 | -0.083 |
| EccD1_KO | -0.102 | 0.431 |
| EspI_KO | 0.268 | 0.676 |
| PE35_KO | 0.257 | 0.42 |
| PPE68_KO | 0.531 | -0.048 |
| glycerol2 | 0.073 | -0.113 |
| lignocerate | -0.323 | -0.862 |
| oleate | 0.336 | 0.492 |
| phosphatidylcholine | 0.022 | 0.245 |
| acetate | -1.034 | -0.761 |
| glucAc | -0.98 | -2.642 |
| Rv0950ko | 0.271 | 1.095 |
| Rv1096ko | 0.305 | -0.609 |
| Rv3684ko | -0.698 | -0.599 |
| delta_otsA_trehalose | -0.232 | -0.335 |