Top 10 genes with highest correlation to Rv0068/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3762c/- | (cc=0.4881) | info on Rv3762c/- |
| Rv0369c/- | (cc=0.472) | info on Rv0369c/- |
| Rv1496/- | (cc=0.4695) | info on Rv1496/- |
| Rv3108/- | (cc=0.4644) | info on Rv3108/- |
| Rv0844c/narL | (cc=0.4525) | info on Rv0844c/narL |
| Rv1517/- | (cc=0.4492) | info on Rv1517/- |
| Rv2151c/ftsQ | (cc=0.4403) | info on Rv2151c/ftsQ |
| Rv2758c/vapB21 | (cc=0.4365) | info on Rv2758c/vapB21 |
| Rv3398c/idsA1 | (cc=0.434) | info on Rv3398c/idsA1 |
| Rv3828c/- | (cc=0.432) | info on Rv3828c/- |
Correlation of Rv0068/- with Rv2758c/vapB21
Normalized LFCs for Rv0068/-:
(description and provenance of datasets)
| Rv0068/- | Rv2758c/vapB21 | |
| Fe_supp_jason_reseq | 1.209 | 0.709 |
| low_pH_jason_reseq | -0.487 | -1.561 |
| NO_jason_reseq | 0.055 | -0.953 |
| B6_jason_reseq | -0.62 | -2.408 |
| MHCII_jason_reseq | -1.187 | -2.023 |
| Isoniazid02 | 0.067 | -0.383 |
| Rifampicin4 | -0.309 | 0.785 |
| Ethambutol3 | -0.159 | 0.27 |
| Meropenem3 | -0.188 | 1.269 |
| Vancomycin16 | 0.3 | 0.106 |
| Rv2680_day32 | 0.158 | -1.524 |
| H37Rv_KO_MarP | 0.93 | 1.456 |
| hypoxia_3wks | 0.179 | 0.0 |
| hypoxia_6wks | 0.203 | -0.77 |
| glycerol | -0.205 | -0.742 |
| cholesterol | 0.727 | -0.242 |
| AJ | 0.101 | -0.728 |
| Bibs02 | -0.657 | -1.396 |
| Bibs02c | -0.796 | -1.963 |
| BL6 | 0.515 | -0.604 |
| BL6a | 0.0 | -0.423 |
| BXD01 | 0.503 | 0.188 |
| BXD010 | 0.304 | -0.7 |
| BXD011 | 0.0 | 0.14 |
| BXD03 | 0.949 | -0.109 |
| BXD04 | 0.801 | -0.454 |
| BXD05 | -0.03 | -1.141 |
| BXD06 | 0.348 | 0.713 |
| BXD07 | 0.108 | 0.533 |
| BXD08 | 0.26 | -0.488 |
| BXD09 | 0.031 | 1.42 |
| CAST | -0.369 | -1.582 |
| CCcont | 0.836 | 1.808 |
| DS01 | -0.337 | -1.292 |
| DS02 | -0.424 | -2.04 |
| DS04 | -0.103 | -2.014 |
| DS0c | 0.17 | 0.313 |
| GP01 | 0.117 | 0.572 |
| GP02 | -0.307 | -0.781 |
| GP0c | -0.289 | -0.799 |
| NOD | -0.19 | -1.38 |
| NZO | -0.461 | -1.225 |
| PWK | 0.578 | -1.84 |
| H37Rv_KO_CtpC | 0.568 | 0.288 |
| H37Rv_KO_CtpD | 1.114 | -1.074 |
| H37Rv_KO_Rv1272 | 0.267 | 1.466 |
| H37Rv_KO_SugABC | 1.087 | -0.929 |
| H37Rv_KO_MbtN | 0.72 | -0.127 |
| Trans05 | 0.198 | -0.41 |
| macrophage_unactivated | 0.912 | 0.9 |
| IL1 | 0.629 | 0.0 |
| Rapamycin | 0.451 | 0.522 |
| Tcell | 1.271 | 1.166 |
| GMCSF | 0.388 | 1.7 |
| IFNab | 0.444 | 0.632 |
| IFNg | 0.214 | 0.762 |
| IFNg_GMCSF1 | 0.17 | -0.446 |
| Rv1432_day32 | 0.519 | 0.0 |
| Rv1565c_day32 | 0.25 | 0.0 |
| secA2_input | 0.111 | 1.739 |
| delta_Rv3594 | -0.338 | -2.164 |
| delta_Rv3717 | -0.703 | -1.194 |
| delta_Rv3811 | -0.265 | -2.318 |
| delta_Rv0954 | -0.651 | -1.043 |
| PonA1 | 0.639 | -0.256 |
| EccD1_KO | 0.372 | -1.51 |
| EspI_KO | -0.436 | -3.679 |
| PE35_KO | 0.175 | -1.339 |
| PPE68_KO | 0.157 | -1.328 |
| glycerol2 | 0.595 | 1.359 |
| lignocerate | 0.401 | 2.159 |
| oleate | 0.55 | -1.791 |
| phosphatidylcholine | 0.525 | 1.443 |
| acetate | -0.219 | 2.031 |
| glucAc | -0.089 | 2.565 |
| Rv0950ko | 0.467 | -0.739 |
| Rv1096ko | 0.926 | -0.582 |
| Rv3684ko | -0.406 | -0.305 |
| delta_otsA_trehalose | -0.913 | -1.336 |