Top 10 genes with highest correlation to Rv0063/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1675c/cmr | (cc=0.5603) | info on Rv1675c/cmr |
| Rv0669c/- | (cc=0.5197) | info on Rv0669c/- |
| Rv0338c/- | (cc=0.5024) | info on Rv0338c/- |
| Rv3283/sseA | (cc=0.4817) | info on Rv3283/sseA |
| Rv2268c/cyp128 | (cc=0.4799) | info on Rv2268c/cyp128 |
| Rv1371/- | (cc=0.4686) | info on Rv1371/- |
| Rv2431c/PE25 | (cc=0.4568) | info on Rv2431c/PE25 |
| Rv3509c/ilvX | (cc=0.4437) | info on Rv3509c/ilvX |
| Rv3154/nuoJ | (cc=0.4374) | info on Rv3154/nuoJ |
| Rv3529c/- | (cc=0.435) | info on Rv3529c/- |
Correlation of Rv0063/- with Rv1675c/cmr
Normalized LFCs for Rv0063/-:
(description and provenance of datasets)
| Rv0063/- | Rv1675c/cmr | |
| Fe_supp_jason_reseq | -0.568 | -0.17 |
| low_pH_jason_reseq | -0.172 | 0.0 |
| NO_jason_reseq | -0.026 | 0.179 |
| B6_jason_reseq | 0.872 | -0.162 |
| MHCII_jason_reseq | 0.139 | 1.183 |
| Isoniazid02 | -0.228 | -0.63 |
| Rifampicin4 | 0.0 | -1.124 |
| Ethambutol3 | -0.134 | -0.786 |
| Meropenem3 | 0.037 | -0.394 |
| Vancomycin16 | 0.218 | -0.613 |
| Rv2680_day32 | -0.874 | -0.08 |
| H37Rv_KO_MarP | 0.775 | 0.109 |
| hypoxia_3wks | -0.805 | -0.805 |
| hypoxia_6wks | -0.24 | -0.464 |
| glycerol | 1.176 | 1.179 |
| cholesterol | 2.914 | 5.239 |
| AJ | 0.788 | 0.371 |
| Bibs02 | -0.029 | 0.306 |
| Bibs02c | 0.587 | 1.015 |
| BL6 | 0.621 | 0.303 |
| BL6a | 0.43 | 0.317 |
| BXD01 | -0.098 | -1.107 |
| BXD010 | 0.261 | -0.084 |
| BXD011 | 0.587 | 0.143 |
| BXD03 | 0.756 | 0.357 |
| BXD04 | 0.354 | -1.13 |
| BXD05 | 0.599 | 0.645 |
| BXD06 | 0.043 | 0.693 |
| BXD07 | 0.148 | 0.232 |
| BXD08 | 0.011 | -0.671 |
| BXD09 | -0.046 | 0.012 |
| CAST | 0.516 | 0.507 |
| CCcont | 0.07 | -0.82 |
| DS01 | 1.136 | 0.145 |
| DS02 | 0.726 | 0.153 |
| DS04 | 1.318 | 0.839 |
| DS0c | 0.662 | 0.244 |
| GP01 | 0.201 | -0.23 |
| GP02 | -0.748 | -1.06 |
| GP0c | -0.251 | -0.333 |
| NOD | 1.36 | -0.021 |
| NZO | 0.446 | 0.649 |
| PWK | 0.924 | -0.054 |
| H37Rv_KO_CtpC | 0.0 | 0.272 |
| H37Rv_KO_CtpD | -0.283 | 0.99 |
| H37Rv_KO_Rv1272 | -0.233 | -0.554 |
| H37Rv_KO_SugABC | 0.942 | -1.147 |
| H37Rv_KO_MbtN | 0.276 | -1.313 |
| Trans05 | -0.548 | 0.934 |
| macrophage_unactivated | -0.363 | -0.944 |
| IL1 | -0.053 | -0.222 |
| Rapamycin | -0.835 | -0.724 |
| Tcell | -0.606 | -1.274 |
| GMCSF | 0.166 | 0.789 |
| IFNab | 0.0 | 0.094 |
| IFNg | -0.048 | -0.23 |
| IFNg_GMCSF1 | -0.088 | 0.097 |
| Rv1432_day32 | -0.089 | -2.941 |
| Rv1565c_day32 | 0.351 | 0.619 |
| secA2_input | 0.095 | -0.739 |
| delta_Rv3594 | -0.159 | 0.058 |
| delta_Rv3717 | -0.458 | -0.292 |
| delta_Rv3811 | -0.607 | 0.909 |
| delta_Rv0954 | 0.522 | -1.012 |
| PonA1 | 0.658 | 0.705 |
| EccD1_KO | -0.178 | -0.184 |
| EspI_KO | -0.317 | -1.728 |
| PE35_KO | 0.271 | -0.697 |
| PPE68_KO | 0.266 | -1.142 |
| glycerol2 | 0.048 | -2.609 |
| lignocerate | 0.664 | -0.756 |
| oleate | -1.212 | -2.64 |
| phosphatidylcholine | -0.253 | -1.852 |
| acetate | 0.484 | 0.06 |
| glucAc | 0.575 | -0.242 |
| Rv0950ko | 0.425 | 0.199 |
| Rv1096ko | 0.392 | -0.721 |
| Rv3684ko | 0.747 | 0.111 |
| delta_otsA_trehalose | -0.535 | -0.987 |