Top 10 genes with highest correlation to Rv0057/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3711c/dnaQ | (cc=0.51) | info on Rv3711c/dnaQ |
| Rv3890c/esxC | (cc=0.4927) | info on Rv3890c/esxC |
| Rv2516c/- | (cc=0.478) | info on Rv2516c/- |
| Rv1112/- | (cc=0.4723) | info on Rv1112/- |
| Rv1435c/- | (cc=0.4436) | info on Rv1435c/- |
| Rv2927c/- | (cc=0.4324) | info on Rv2927c/- |
| Rv2373c/dnaJ2 | (cc=0.4318) | info on Rv2373c/dnaJ2 |
| Rv0364/- | (cc=0.424) | info on Rv0364/- |
| Rv3011c/gatA | (cc=0.4209) | info on Rv3011c/gatA |
| Rv0063/- | (cc=0.4173) | info on Rv0063/- |
Correlation of Rv0057/- with Rv1435c/-
Normalized LFCs for Rv0057/-:
(description and provenance of datasets)
| Rv0057/- | Rv1435c/- | |
| Fe_supp_jason_reseq | -0.033 | -1.814 |
| low_pH_jason_reseq | -1.032 | -1.447 |
| NO_jason_reseq | -1.297 | 0.389 |
| B6_jason_reseq | -0.873 | -1.602 |
| MHCII_jason_reseq | -0.572 | -0.561 |
| Isoniazid02 | -0.263 | -0.33 |
| Rifampicin4 | -1.819 | -4.151 |
| Ethambutol3 | -0.764 | -0.098 |
| Meropenem3 | -0.335 | 0.392 |
| Vancomycin16 | -0.565 | -4.067 |
| Rv2680_day32 | 0.371 | 0.354 |
| H37Rv_KO_MarP | 0.301 | -0.46 |
| hypoxia_3wks | -1.559 | -2.293 |
| hypoxia_6wks | -0.685 | -2.266 |
| glycerol | 0.341 | 0.796 |
| cholesterol | 0.789 | 0.752 |
| AJ | 0.792 | 0.941 |
| Bibs02 | 0.281 | 0.91 |
| Bibs02c | 1.699 | 0.524 |
| BL6 | -0.198 | 0.716 |
| BL6a | 1.507 | 0.851 |
| BXD01 | -0.416 | 0.068 |
| BXD010 | -0.258 | 0.045 |
| BXD011 | -0.376 | -0.247 |
| BXD03 | 0.514 | 0.137 |
| BXD04 | 0.19 | 0.105 |
| BXD05 | -0.646 | -0.381 |
| BXD06 | 0.42 | -0.176 |
| BXD07 | -0.19 | -0.183 |
| BXD08 | 0.024 | -0.687 |
| BXD09 | 0.237 | 0.57 |
| CAST | 0.529 | 0.792 |
| CCcont | 0.548 | 0.743 |
| DS01 | 1.235 | 2.007 |
| DS02 | 0.466 | 2.043 |
| DS04 | 0.17 | 0.833 |
| DS0c | 0.262 | 1.328 |
| GP01 | 0.255 | 1.244 |
| GP02 | -0.789 | 2.058 |
| GP0c | -0.966 | 0.233 |
| NOD | 1.709 | -0.636 |
| NZO | 0.627 | 1.241 |
| PWK | 1.722 | -0.144 |
| H37Rv_KO_CtpC | 0.059 | 0.735 |
| H37Rv_KO_CtpD | -0.121 | -0.167 |
| H37Rv_KO_Rv1272 | 0.799 | 1.66 |
| H37Rv_KO_SugABC | 0.12 | 0.587 |
| H37Rv_KO_MbtN | -0.058 | 0.018 |
| Trans05 | -0.049 | 0.787 |
| macrophage_unactivated | 0.404 | 0.328 |
| IL1 | -0.78 | 0.967 |
| Rapamycin | -0.807 | 0.559 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.338 | 0.378 |
| IFNab | -0.248 | 0.493 |
| IFNg | 0.775 | 0.684 |
| IFNg_GMCSF1 | -0.17 | 0.914 |
| Rv1432_day32 | -0.485 | -0.299 |
| Rv1565c_day32 | -1.112 | -0.967 |
| secA2_input | -0.485 | 0.186 |
| delta_Rv3594 | 0.424 | -0.381 |
| delta_Rv3717 | 0.871 | -0.044 |
| delta_Rv3811 | 0.668 | -0.474 |
| delta_Rv0954 | 0.826 | -0.123 |
| PonA1 | 0.152 | -0.352 |
| EccD1_KO | -1.503 | -0.858 |
| EspI_KO | -0.841 | -0.183 |
| PE35_KO | -1.552 | -0.073 |
| PPE68_KO | -1.542 | 0.384 |
| glycerol2 | 0.105 | 0.706 |
| lignocerate | 0.15 | 1.846 |
| oleate | -1.021 | -0.669 |
| phosphatidylcholine | -0.398 | 1.013 |
| acetate | 0.884 | 1.662 |
| glucAc | 0.923 | 1.034 |
| Rv0950ko | 0.498 | 1.315 |
| Rv1096ko | 0.781 | -0.449 |
| Rv3684ko | 0.0 | -0.278 |
| delta_otsA_trehalose | -0.16 | 0.116 |