Top 10 genes with highest correlation to Rv0057/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3711c/dnaQ | (cc=0.51) | info on Rv3711c/dnaQ |
| Rv3890c/esxC | (cc=0.4927) | info on Rv3890c/esxC |
| Rv2516c/- | (cc=0.478) | info on Rv2516c/- |
| Rv1112/- | (cc=0.4723) | info on Rv1112/- |
| Rv1435c/- | (cc=0.4436) | info on Rv1435c/- |
| Rv2927c/- | (cc=0.4324) | info on Rv2927c/- |
| Rv2373c/dnaJ2 | (cc=0.4318) | info on Rv2373c/dnaJ2 |
| Rv0364/- | (cc=0.424) | info on Rv0364/- |
| Rv3011c/gatA | (cc=0.4209) | info on Rv3011c/gatA |
| Rv0063/- | (cc=0.4173) | info on Rv0063/- |
Correlation of Rv0057/- with Rv0364/-
Normalized LFCs for Rv0057/-:
(description and provenance of datasets)
| Rv0057/- | Rv0364/- | |
| Fe_supp_jason_reseq | -0.033 | 0.227 |
| low_pH_jason_reseq | -1.032 | 0.124 |
| NO_jason_reseq | -1.297 | 0.557 |
| B6_jason_reseq | -0.873 | -0.736 |
| MHCII_jason_reseq | -0.572 | -0.905 |
| Isoniazid02 | -0.263 | -0.097 |
| Rifampicin4 | -1.819 | -0.374 |
| Ethambutol3 | -0.764 | -0.793 |
| Meropenem3 | -0.335 | -0.165 |
| Vancomycin16 | -0.565 | -0.562 |
| Rv2680_day32 | 0.371 | 2.062 |
| H37Rv_KO_MarP | 0.301 | -0.906 |
| hypoxia_3wks | -1.559 | -0.427 |
| hypoxia_6wks | -0.685 | 0.106 |
| glycerol | 0.341 | -0.136 |
| cholesterol | 0.789 | 0.0 |
| AJ | 0.792 | 0.146 |
| Bibs02 | 0.281 | 0.927 |
| Bibs02c | 1.699 | -1.028 |
| BL6 | -0.198 | 0.53 |
| BL6a | 1.507 | 0.562 |
| BXD01 | -0.416 | 0.856 |
| BXD010 | -0.258 | -0.278 |
| BXD011 | -0.376 | 1.463 |
| BXD03 | 0.514 | 0.84 |
| BXD04 | 0.19 | 0.288 |
| BXD05 | -0.646 | 1.018 |
| BXD06 | 0.42 | 1.411 |
| BXD07 | -0.19 | 0.861 |
| BXD08 | 0.024 | 0.963 |
| BXD09 | 0.237 | 1.417 |
| CAST | 0.529 | -0.155 |
| CCcont | 0.548 | 1.35 |
| DS01 | 1.235 | -0.159 |
| DS02 | 0.466 | 1.966 |
| DS04 | 0.17 | -0.583 |
| DS0c | 0.262 | -0.85 |
| GP01 | 0.255 | 0.777 |
| GP02 | -0.789 | -0.25 |
| GP0c | -0.966 | 0.369 |
| NOD | 1.709 | 1.699 |
| NZO | 0.627 | -0.134 |
| PWK | 1.722 | 0.915 |
| H37Rv_KO_CtpC | 0.059 | 0.379 |
| H37Rv_KO_CtpD | -0.121 | -0.496 |
| H37Rv_KO_Rv1272 | 0.799 | 0.4 |
| H37Rv_KO_SugABC | 0.12 | -0.298 |
| H37Rv_KO_MbtN | -0.058 | 0.959 |
| Trans05 | -0.049 | 0.371 |
| macrophage_unactivated | 0.404 | 0.164 |
| IL1 | -0.78 | -0.329 |
| Rapamycin | -0.807 | 0.316 |
| Tcell | 0.0 | 1.352 |
| GMCSF | 0.338 | -0.779 |
| IFNab | -0.248 | 0.311 |
| IFNg | 0.775 | -0.617 |
| IFNg_GMCSF1 | -0.17 | 2.316 |
| Rv1432_day32 | -0.485 | 0.0 |
| Rv1565c_day32 | -1.112 | 0.0 |
| secA2_input | -0.485 | 0.283 |
| delta_Rv3594 | 0.424 | 0.353 |
| delta_Rv3717 | 0.871 | 1.446 |
| delta_Rv3811 | 0.668 | 1.947 |
| delta_Rv0954 | 0.826 | 0.886 |
| PonA1 | 0.152 | -0.95 |
| EccD1_KO | -1.503 | -1.441 |
| EspI_KO | -0.841 | -1.383 |
| PE35_KO | -1.552 | -2.354 |
| PPE68_KO | -1.542 | -3.424 |
| glycerol2 | 0.105 | -0.321 |
| lignocerate | 0.15 | -0.341 |
| oleate | -1.021 | -1.191 |
| phosphatidylcholine | -0.398 | -0.88 |
| acetate | 0.884 | -0.221 |
| glucAc | 0.923 | 0.451 |
| Rv0950ko | 0.498 | 1.668 |
| Rv1096ko | 0.781 | 2.714 |
| Rv3684ko | 0.0 | 2.021 |
| delta_otsA_trehalose | -0.16 | -0.861 |