Top 10 genes with highest correlation to Rv0057/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3711c/dnaQ | (cc=0.51) | info on Rv3711c/dnaQ |
| Rv3890c/esxC | (cc=0.4927) | info on Rv3890c/esxC |
| Rv2516c/- | (cc=0.478) | info on Rv2516c/- |
| Rv1112/- | (cc=0.4723) | info on Rv1112/- |
| Rv1435c/- | (cc=0.4436) | info on Rv1435c/- |
| Rv2927c/- | (cc=0.4324) | info on Rv2927c/- |
| Rv2373c/dnaJ2 | (cc=0.4318) | info on Rv2373c/dnaJ2 |
| Rv0364/- | (cc=0.424) | info on Rv0364/- |
| Rv3011c/gatA | (cc=0.4209) | info on Rv3011c/gatA |
| Rv0063/- | (cc=0.4173) | info on Rv0063/- |
Correlation of Rv0057/- with Rv3711c/dnaQ
Normalized LFCs for Rv0057/-:
(description and provenance of datasets)
| Rv0057/- | Rv3711c/dnaQ | |
| Fe_supp_jason_reseq | -0.033 | -0.433 |
| low_pH_jason_reseq | -1.032 | -0.047 |
| NO_jason_reseq | -1.297 | -0.074 |
| B6_jason_reseq | -0.873 | -0.604 |
| MHCII_jason_reseq | -0.572 | -0.194 |
| Isoniazid02 | -0.263 | -0.167 |
| Rifampicin4 | -1.819 | -0.571 |
| Ethambutol3 | -0.764 | -0.209 |
| Meropenem3 | -0.335 | 1.414 |
| Vancomycin16 | -0.565 | -0.332 |
| Rv2680_day32 | 0.371 | 0.627 |
| H37Rv_KO_MarP | 0.301 | -0.238 |
| hypoxia_3wks | -1.559 | -0.439 |
| hypoxia_6wks | -0.685 | -0.328 |
| glycerol | 0.341 | 1.463 |
| cholesterol | 0.789 | 0.32 |
| AJ | 0.792 | 0.0 |
| Bibs02 | 0.281 | -0.086 |
| Bibs02c | 1.699 | 0.788 |
| BL6 | -0.198 | 0.599 |
| BL6a | 1.507 | 0.375 |
| BXD01 | -0.416 | -0.392 |
| BXD010 | -0.258 | -0.092 |
| BXD011 | -0.376 | 0.157 |
| BXD03 | 0.514 | 0.175 |
| BXD04 | 0.19 | -0.01 |
| BXD05 | -0.646 | 0.47 |
| BXD06 | 0.42 | 0.209 |
| BXD07 | -0.19 | 0.042 |
| BXD08 | 0.024 | 0.06 |
| BXD09 | 0.237 | -0.089 |
| CAST | 0.529 | 0.522 |
| CCcont | 0.548 | -0.012 |
| DS01 | 1.235 | 0.89 |
| DS02 | 0.466 | 0.44 |
| DS04 | 0.17 | 0.645 |
| DS0c | 0.262 | 0.479 |
| GP01 | 0.255 | -0.173 |
| GP02 | -0.789 | 0.068 |
| GP0c | -0.966 | 0.517 |
| NOD | 1.709 | -0.124 |
| NZO | 0.627 | 0.377 |
| PWK | 1.722 | 0.696 |
| H37Rv_KO_CtpC | 0.059 | -1.011 |
| H37Rv_KO_CtpD | -0.121 | 0.811 |
| H37Rv_KO_Rv1272 | 0.799 | 0.837 |
| H37Rv_KO_SugABC | 0.12 | 0.921 |
| H37Rv_KO_MbtN | -0.058 | -0.228 |
| Trans05 | -0.049 | 0.413 |
| macrophage_unactivated | 0.404 | -0.893 |
| IL1 | -0.78 | -0.412 |
| Rapamycin | -0.807 | 0.028 |
| Tcell | 0.0 | -0.424 |
| GMCSF | 0.338 | -0.217 |
| IFNab | -0.248 | 0.209 |
| IFNg | 0.775 | 0.251 |
| IFNg_GMCSF1 | -0.17 | 0.622 |
| Rv1432_day32 | -0.485 | 0.175 |
| Rv1565c_day32 | -1.112 | -0.499 |
| secA2_input | -0.485 | 1.19 |
| delta_Rv3594 | 0.424 | 0.889 |
| delta_Rv3717 | 0.871 | 1.055 |
| delta_Rv3811 | 0.668 | -0.034 |
| delta_Rv0954 | 0.826 | -0.234 |
| PonA1 | 0.152 | 0.436 |
| EccD1_KO | -1.503 | -1.25 |
| EspI_KO | -0.841 | -0.91 |
| PE35_KO | -1.552 | -1.388 |
| PPE68_KO | -1.542 | -1.523 |
| glycerol2 | 0.105 | 0.345 |
| lignocerate | 0.15 | 0.487 |
| oleate | -1.021 | -0.553 |
| phosphatidylcholine | -0.398 | -0.129 |
| acetate | 0.884 | 0.387 |
| glucAc | 0.923 | 0.267 |
| Rv0950ko | 0.498 | 0.606 |
| Rv1096ko | 0.781 | 0.781 |
| Rv3684ko | 0.0 | 0.819 |
| delta_otsA_trehalose | -0.16 | 0.657 |