Top 10 genes with highest correlation to Rv0056/rplI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2404c/lepA | (cc=0.6221) | info on Rv2404c/lepA |
| Rv0806c/cpsY | (cc=0.508) | info on Rv0806c/cpsY |
| Rv1253/deaD | (cc=0.4939) | info on Rv1253/deaD |
| Rv3041c/- | (cc=0.4891) | info on Rv3041c/- |
| Rv1829/- | (cc=0.4848) | info on Rv1829/- |
| Rv2966c/- | (cc=0.4848) | info on Rv2966c/- |
| Rv1019/- | (cc=0.4819) | info on Rv1019/- |
| Rv3544c/fadE28 | (cc=0.4784) | info on Rv3544c/fadE28 |
| Rv1822/pgsA2 | (cc=0.4752) | info on Rv1822/pgsA2 |
| Rv2733c/- | (cc=0.4733) | info on Rv2733c/- |
Correlation of Rv0056/rplI with Rv2733c/-
Normalized LFCs for Rv0056/rplI:
(description and provenance of datasets)
| Rv0056/rplI | Rv2733c/- | |
| Fe_supp_jason_reseq | 1.228 | 1.542 |
| low_pH_jason_reseq | -0.179 | -1.258 |
| NO_jason_reseq | -0.914 | 0.748 |
| B6_jason_reseq | -0.538 | -0.675 |
| MHCII_jason_reseq | 0.355 | 1.256 |
| Isoniazid02 | 2.183 | -0.627 |
| Rifampicin4 | 1.695 | 0.967 |
| Ethambutol3 | -0.85 | -0.143 |
| Meropenem3 | -1.842 | -0.059 |
| Vancomycin16 | 0.172 | -0.759 |
| Rv2680_day32 | 0.0 | 0.105 |
| H37Rv_KO_MarP | 1.369 | 0.102 |
| hypoxia_3wks | -1.798 | -1.974 |
| hypoxia_6wks | -1.148 | -1.992 |
| glycerol | 0.484 | 0.411 |
| cholesterol | -0.663 | 0.326 |
| AJ | -0.724 | -1.365 |
| Bibs02 | -0.062 | -0.049 |
| Bibs02c | -2.474 | 0.285 |
| BL6 | -0.949 | -2.262 |
| BL6a | -1.013 | 0.0 |
| BXD01 | -1.411 | -1.462 |
| BXD010 | -1.27 | -1.21 |
| BXD011 | 0.199 | -0.779 |
| BXD03 | 0.36 | -0.927 |
| BXD04 | -0.777 | -1.985 |
| BXD05 | -1.223 | -0.701 |
| BXD06 | 0.129 | -1.605 |
| BXD07 | -0.432 | -1.021 |
| BXD08 | -0.192 | -1.656 |
| BXD09 | -0.971 | -1.238 |
| CAST | -0.616 | -2.868 |
| CCcont | 1.082 | -0.778 |
| DS01 | -2.146 | -1.282 |
| DS02 | -2.571 | -1.787 |
| DS04 | -1.218 | -1.897 |
| DS0c | -1.97 | -0.82 |
| GP01 | -1.167 | -0.536 |
| GP02 | -0.984 | -0.451 |
| GP0c | -1.537 | -0.891 |
| NOD | -0.701 | -1.121 |
| NZO | -2.16 | -1.639 |
| PWK | -2.124 | -1.501 |
| H37Rv_KO_CtpC | -1.611 | -0.614 |
| H37Rv_KO_CtpD | -1.372 | -0.716 |
| H37Rv_KO_Rv1272 | 2.007 | 0.566 |
| H37Rv_KO_SugABC | 2.177 | -0.125 |
| H37Rv_KO_MbtN | 0.402 | 0.276 |
| Trans05 | -0.532 | -0.964 |
| macrophage_unactivated | 0.0 | 0.357 |
| IL1 | -0.546 | 0.335 |
| Rapamycin | 0.0 | -0.681 |
| Tcell | 0.186 | 1.808 |
| GMCSF | -1.7 | 0.708 |
| IFNab | -0.363 | -0.995 |
| IFNg | -0.673 | -0.981 |
| IFNg_GMCSF1 | -0.377 | -1.034 |
| Rv1432_day32 | 0.0 | 0.198 |
| Rv1565c_day32 | -0.7 | -0.509 |
| secA2_input | 2.677 | 0.131 |
| delta_Rv3594 | 2.509 | 0.867 |
| delta_Rv3717 | 2.718 | 1.224 |
| delta_Rv3811 | 1.782 | 0.843 |
| delta_Rv0954 | 2.638 | 2.459 |
| PonA1 | 0.352 | 0.851 |
| EccD1_KO | -0.135 | 1.529 |
| EspI_KO | -1.127 | 1.326 |
| PE35_KO | -1.152 | 1.091 |
| PPE68_KO | -0.934 | 0.992 |
| glycerol2 | 0.552 | -2.708 |
| lignocerate | -1.559 | -2.06 |
| oleate | -1.086 | -2.247 |
| phosphatidylcholine | -2.105 | -1.828 |
| acetate | -1.194 | 0.166 |
| glucAc | -0.695 | -0.149 |
| Rv0950ko | 0.072 | -0.238 |
| Rv1096ko | -1.583 | -1.396 |
| Rv3684ko | -0.246 | -0.77 |
| delta_otsA_trehalose | 1.163 | 0.439 |