Top 10 genes with highest correlation to Rv0056/rplI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2404c/lepA | (cc=0.6221) | info on Rv2404c/lepA |
| Rv0806c/cpsY | (cc=0.508) | info on Rv0806c/cpsY |
| Rv1253/deaD | (cc=0.4939) | info on Rv1253/deaD |
| Rv3041c/- | (cc=0.4891) | info on Rv3041c/- |
| Rv1829/- | (cc=0.4848) | info on Rv1829/- |
| Rv2966c/- | (cc=0.4848) | info on Rv2966c/- |
| Rv1019/- | (cc=0.4819) | info on Rv1019/- |
| Rv3544c/fadE28 | (cc=0.4784) | info on Rv3544c/fadE28 |
| Rv1822/pgsA2 | (cc=0.4752) | info on Rv1822/pgsA2 |
| Rv2733c/- | (cc=0.4733) | info on Rv2733c/- |
Correlation of Rv0056/rplI with Rv1253/deaD
Normalized LFCs for Rv0056/rplI:
(description and provenance of datasets)
| Rv0056/rplI | Rv1253/deaD | |
| Fe_supp_jason_reseq | 1.228 | 0.485 |
| low_pH_jason_reseq | -0.179 | 0.853 |
| NO_jason_reseq | -0.914 | 0.249 |
| B6_jason_reseq | -0.538 | -1.083 |
| MHCII_jason_reseq | 0.355 | 0.357 |
| Isoniazid02 | 2.183 | 1.272 |
| Rifampicin4 | 1.695 | 0.165 |
| Ethambutol3 | -0.85 | 0.437 |
| Meropenem3 | -1.842 | -0.878 |
| Vancomycin16 | 0.172 | -0.289 |
| Rv2680_day32 | 0.0 | 0.062 |
| H37Rv_KO_MarP | 1.369 | 0.689 |
| hypoxia_3wks | -1.798 | 0.243 |
| hypoxia_6wks | -1.148 | -0.223 |
| glycerol | 0.484 | 0.282 |
| cholesterol | -0.663 | 0.413 |
| AJ | -0.724 | 0.0 |
| Bibs02 | -0.062 | 0.393 |
| Bibs02c | -2.474 | -0.336 |
| BL6 | -0.949 | 0.878 |
| BL6a | -1.013 | 0.115 |
| BXD01 | -1.411 | 0.039 |
| BXD010 | -1.27 | 0.145 |
| BXD011 | 0.199 | -0.039 |
| BXD03 | 0.36 | -0.504 |
| BXD04 | -0.777 | -0.136 |
| BXD05 | -1.223 | 0.354 |
| BXD06 | 0.129 | -0.061 |
| BXD07 | -0.432 | 0.194 |
| BXD08 | -0.192 | 0.04 |
| BXD09 | -0.971 | 0.042 |
| CAST | -0.616 | -0.716 |
| CCcont | 1.082 | 0.493 |
| DS01 | -2.146 | -0.036 |
| DS02 | -2.571 | -0.276 |
| DS04 | -1.218 | 0.346 |
| DS0c | -1.97 | 0.0 |
| GP01 | -1.167 | -0.092 |
| GP02 | -0.984 | 0.025 |
| GP0c | -1.537 | -0.981 |
| NOD | -0.701 | 0.371 |
| NZO | -2.16 | -0.357 |
| PWK | -2.124 | -0.817 |
| H37Rv_KO_CtpC | -1.611 | 0.072 |
| H37Rv_KO_CtpD | -1.372 | -0.098 |
| H37Rv_KO_Rv1272 | 2.007 | 0.419 |
| H37Rv_KO_SugABC | 2.177 | -0.457 |
| H37Rv_KO_MbtN | 0.402 | -0.576 |
| Trans05 | -0.532 | 0.131 |
| macrophage_unactivated | 0.0 | 0.215 |
| IL1 | -0.546 | -0.05 |
| Rapamycin | 0.0 | 0.503 |
| Tcell | 0.186 | 0.055 |
| GMCSF | -1.7 | 0.267 |
| IFNab | -0.363 | 0.305 |
| IFNg | -0.673 | 0.045 |
| IFNg_GMCSF1 | -0.377 | 0.468 |
| Rv1432_day32 | 0.0 | -0.386 |
| Rv1565c_day32 | -0.7 | 1.556 |
| secA2_input | 2.677 | 0.585 |
| delta_Rv3594 | 2.509 | 1.592 |
| delta_Rv3717 | 2.718 | 1.432 |
| delta_Rv3811 | 1.782 | 1.801 |
| delta_Rv0954 | 2.638 | 1.154 |
| PonA1 | 0.352 | 1.377 |
| EccD1_KO | -0.135 | -0.437 |
| EspI_KO | -1.127 | -0.799 |
| PE35_KO | -1.152 | 0.578 |
| PPE68_KO | -0.934 | 0.134 |
| glycerol2 | 0.552 | -0.783 |
| lignocerate | -1.559 | -0.241 |
| oleate | -1.086 | -0.906 |
| phosphatidylcholine | -2.105 | -0.115 |
| acetate | -1.194 | 0.549 |
| glucAc | -0.695 | -0.128 |
| Rv0950ko | 0.072 | 0.0 |
| Rv1096ko | -1.583 | 0.112 |
| Rv3684ko | -0.246 | 0.521 |
| delta_otsA_trehalose | 1.163 | 0.692 |