Top 10 genes with highest correlation to Rv0056/rplI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2404c/lepA | (cc=0.6221) | info on Rv2404c/lepA |
| Rv0806c/cpsY | (cc=0.508) | info on Rv0806c/cpsY |
| Rv1253/deaD | (cc=0.4939) | info on Rv1253/deaD |
| Rv3041c/- | (cc=0.4891) | info on Rv3041c/- |
| Rv1829/- | (cc=0.4848) | info on Rv1829/- |
| Rv2966c/- | (cc=0.4848) | info on Rv2966c/- |
| Rv1019/- | (cc=0.4819) | info on Rv1019/- |
| Rv3544c/fadE28 | (cc=0.4784) | info on Rv3544c/fadE28 |
| Rv1822/pgsA2 | (cc=0.4752) | info on Rv1822/pgsA2 |
| Rv2733c/- | (cc=0.4733) | info on Rv2733c/- |
Correlation of Rv0056/rplI with Rv1829/-
Normalized LFCs for Rv0056/rplI:
(description and provenance of datasets)
| Rv0056/rplI | Rv1829/- | |
| Fe_supp_jason_reseq | 1.228 | -0.062 |
| low_pH_jason_reseq | -0.179 | -0.663 |
| NO_jason_reseq | -0.914 | -3.226 |
| B6_jason_reseq | -0.538 | -3.226 |
| MHCII_jason_reseq | 0.355 | -2.269 |
| Isoniazid02 | 2.183 | 2.057 |
| Rifampicin4 | 1.695 | 1.099 |
| Ethambutol3 | -0.85 | 1.321 |
| Meropenem3 | -1.842 | -1.388 |
| Vancomycin16 | 0.172 | 1.162 |
| Rv2680_day32 | 0.0 | -0.8 |
| H37Rv_KO_MarP | 1.369 | -2.028 |
| hypoxia_3wks | -1.798 | -0.279 |
| hypoxia_6wks | -1.148 | -0.856 |
| glycerol | 0.484 | 0.576 |
| cholesterol | -0.663 | -0.294 |
| AJ | -0.724 | -1.729 |
| Bibs02 | -0.062 | -3.113 |
| Bibs02c | -2.474 | -2.827 |
| BL6 | -0.949 | -1.787 |
| BL6a | -1.013 | 0.079 |
| BXD01 | -1.411 | -1.496 |
| BXD010 | -1.27 | -1.066 |
| BXD011 | 0.199 | 0.051 |
| BXD03 | 0.36 | -0.952 |
| BXD04 | -0.777 | -0.191 |
| BXD05 | -1.223 | 0.297 |
| BXD06 | 0.129 | -0.374 |
| BXD07 | -0.432 | -0.975 |
| BXD08 | -0.192 | -1.107 |
| BXD09 | -0.971 | -0.12 |
| CAST | -0.616 | -2.508 |
| CCcont | 1.082 | 1.496 |
| DS01 | -2.146 | -1.311 |
| DS02 | -2.571 | -3.486 |
| DS04 | -1.218 | -0.443 |
| DS0c | -1.97 | -2.011 |
| GP01 | -1.167 | 0.425 |
| GP02 | -0.984 | 0.263 |
| GP0c | -1.537 | 0.694 |
| NOD | -0.701 | -1.769 |
| NZO | -2.16 | -1.176 |
| PWK | -2.124 | -2.965 |
| H37Rv_KO_CtpC | -1.611 | -0.371 |
| H37Rv_KO_CtpD | -1.372 | 0.0 |
| H37Rv_KO_Rv1272 | 2.007 | 0.084 |
| H37Rv_KO_SugABC | 2.177 | 1.277 |
| H37Rv_KO_MbtN | 0.402 | 2.41 |
| Trans05 | -0.532 | -0.202 |
| macrophage_unactivated | 0.0 | 0.527 |
| IL1 | -0.546 | 0.219 |
| Rapamycin | 0.0 | 0.58 |
| Tcell | 0.186 | 1.033 |
| GMCSF | -1.7 | 0.673 |
| IFNab | -0.363 | 1.533 |
| IFNg | -0.673 | -0.826 |
| IFNg_GMCSF1 | -0.377 | -2.341 |
| Rv1432_day32 | 0.0 | -2.383 |
| Rv1565c_day32 | -0.7 | -1.741 |
| secA2_input | 2.677 | -0.789 |
| delta_Rv3594 | 2.509 | 2.452 |
| delta_Rv3717 | 2.718 | 1.781 |
| delta_Rv3811 | 1.782 | 2.074 |
| delta_Rv0954 | 2.638 | 1.499 |
| PonA1 | 0.352 | -0.196 |
| EccD1_KO | -0.135 | 1.039 |
| EspI_KO | -1.127 | 0.411 |
| PE35_KO | -1.152 | 0.945 |
| PPE68_KO | -0.934 | 1.037 |
| glycerol2 | 0.552 | 2.159 |
| lignocerate | -1.559 | -1.218 |
| oleate | -1.086 | -0.651 |
| phosphatidylcholine | -2.105 | -0.774 |
| acetate | -1.194 | -0.111 |
| glucAc | -0.695 | -0.785 |
| Rv0950ko | 0.072 | -0.142 |
| Rv1096ko | -1.583 | -1.731 |
| Rv3684ko | -0.246 | -2.473 |
| delta_otsA_trehalose | 1.163 | 0.002 |